Pseudomonas protegens Cab57: PPC_1654
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Entry
PPC_1654 CDS
T03613
Symbol
rluB
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_1654 (rluB)
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PPC_1654 (rluB)
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPC_1654 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAO61001
LinkDB
All DBs
Position
1819828..1821018
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AA seq
396 aa
AA seq
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MSDTDQNDQEIRPAGEKLQKVLARIGVGSRRDVESWISQGRIKVNGKEATLGLRVDLHDA
ISIDGKVIKREEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKLPRPREGRWINIGRL
DINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAKF
TDIQQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGR
WREMSQYEVDVLSAEVGLTPVAMPQLNAKSKDKLERMQRKSSRPVGKSERVRTLRPANGS
AATPRVSREPQIEGERPGRKPAARPDGERGSRAPRPATGRGTPVAERPADTKRPAKPAPK
SKRPSLVLDKDAPSGKRRGAPAGSGQRPGFGRRKPE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgatcagaacgaccaggaaatccgtccagccggcgaaaaactgcagaaa
gtcctcgcccgcatcggcgtcggctcgcgccgcgatgtcgagtcctggatcagccagggc
cggatcaaggtcaacggcaaagaggccaccctgggcctgcgcgtcgacctgcatgacgcc
atttccatcgatggcaaggtgatcaagcgcgaagaggccgccgaatcggtgcgccgcgtg
atcatgtacaacaagcccgacggcgagatctgcacccgcgacgacccggaaggccgcccg
actgtgttcgacaagctgccgcgtccgcgcgaaggccgctggatcaacattggccgcctg
gacatcaacaccaccggtcttttgatgttcaccaccgacggtgagctggccaaccgcctg
atgcacccttcctacgagatggaccgtgagtacgcggtgcgtgtgcgtggcgaggtcgac
gacgagatgatcgagcgcctcaaggccggcgtcatgctcgaagacggcccggccaagttc
accgacattcagcaggcgcccggtggcgaaggtttcaaccactggtaccactgcgtggtg
atggaaggtcgcaaccgtgaagtgcgccgcttgtgggaatcccagggcctggtggtcagc
cgcctgaagcgcgtgcgcttcggtccggtgttcctcaactccgacctgcccatgggccgc
tggcgcgaaatgagccagtacgaagtcgatgtgctcagcgccgaagtcggcctgacgccg
gtggccatgccgcagctcaatgccaagtccaaggacaagctggagcgcatgcagcgcaaa
tcctcgcgtccggtgggcaagagcgagcgcgtgcgcaccctgcgtccggccaatggtagt
gcggccaccccgcgtgtttcccgcgagccgcagatcgaaggcgagcgtcctggccgcaag
ccggctgcccgtccggatggcgagcgtggctcccgtgctccgcgtccggctactggccgc
ggcactccggtggccgaacgccccgcggacaccaagcgtccggccaagccggcgcccaag
tccaagcgcccaagcctggtgctggacaaggacgcaccgtccggcaagcgccgtggcgcc
ccggccggttccggccagcgtcccggttttggtcgccgcaagccggagtga
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