Pseudomonas protegens Cab57: PPC_1770
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Entry
PPC_1770 CDS
T03613
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00020
Citrate cycle (TCA cycle)
ppro00190
Oxidative phosphorylation
ppro00650
Butanoate metabolism
ppro00720
Other carbon fixation pathways
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
Module
ppro_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppro_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppro_M00149
Succinate dehydrogenase, prokaryotes
ppro_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPC_1770 (sdhA)
00650 Butanoate metabolism
PPC_1770 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PPC_1770 (sdhA)
00720 Other carbon fixation pathways
PPC_1770 (sdhA)
Enzymes [BR:
ppro01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PPC_1770 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Pyr_redox_3
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAO61117
LinkDB
All DBs
Position
1942610..1944382
Genome browser
AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEWYAVDLVKNQDGAF
VGVIAICIETGETTYIRSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAAGEDTIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYRDASDTDVDVALNRLAKLNERTTGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaaccatttcattcgacgccatcatcattggcggcggcggcgccggc
atgcgtgccgcactgcagctggcccagggcggccacaagactgcggtgatcaccaaggtg
ttcccgacccgttcgcacactgtgtctgcccagggcggcatcacttgcgcgatcgcctcg
gcggacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggtcttcgaa
ctggaccacatgggtctgccgttctcccgtaccgaaaccggtcgtatctaccagcgtcct
ttcggcggtcagtccaaggactacggcaagggcggccaggctgctcgtacctgcgcagcg
tccgaccgtaccggtcacgcactgctgcacaccctatatcagggcaacctgaaagccggc
accaccttcctcaacgagtggtacgcagtcgatctggtgaagaaccaggacggcgccttt
gtcggcgtgatcgctatctgcatcgaaaccggcgaaaccacctacatccgctctaaggcc
accgttctggccaccggcggtgcaggtcgtatctacgcctccaccaccaacgctctgatc
aacaccggtgacggcgttggtatggcgctgcgtgctggcgttccggtgcaagacatcgaa
atgtggcagttccacccgaccggcattgccggcgccggtgtactggtaaccgaaggttgc
cgtggtgagggtggttacctgatcaacaagcatggcgagcgtttcatggagcgttatgct
ccgaacgccaaagacctggctggccgcgacgttgttgcgcgctccatggtcaaggaaatc
atcgccggcaacggctgtggcccgaacggcgaccacgtgatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagacgtttgcg
cacgttgacccggtggttgctccggttccggtcgttccaacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcacacagaacgccgctggcgaagacacc
atcatccctggcctgttcgcagtgggtgaagtggcttgcgtatcggtacacggcgccaac
cgtctgggcggcaactcgctgctggacctggtggtgttcggccgtgcagccggtctgcac
ctggaaaaagcgctgaccgacggtatcgaataccgcgacgccagcgacaccgacgttgat
gttgccctgaaccgcctggccaagctcaacgagcgcaccaccggtgaagacgttgcaacc
ctgcgtcgcgagctgcagaactgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtatcgctcagctggctgacctgcgcgagcgtatcgccaacgtcaag
atcaacgacaagtctcaagctttcaacactgcgcgtatcgaagcacttgagctgcagaac
ctgctggaagtggccgaagccactgccatcgctgccgaagtgcgcaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
tacttcccgggtgagaagcgcgttgccaagcgtgcggtcaacttctcgccgaagactgtt
ccgactttcgaaccaaaagtccggacttactaa
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