Pseudomonas protegens Cab57: PPC_1794
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Entry
PPC_1794 CDS
T03613
Name
(GenBank) TonB-dependent outermembrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_1794
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2196
Motif
Other DBs
NCBI-ProteinID:
BAO61141
LinkDB
All DBs
Position
complement(1970411..1972534)
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AA seq
707 aa
AA seq
DB search
MSAGPSPLRLSLLLGMLFGHSVLADDLFLDGTALPEVLTATRLKQSPAAVPGSMTVLDNE
LIKASGARDISELLRLVPGMMVGAISGNQATVNYHGTNASEARRMQVLIDGRSVYRAGLA
TVDWSDIPVAMEDIERIEVFRGPNTVSYGANALMAVVNIITRAPANSHGTRVKLTRGQRG
ISDWYASQGTGWETGDLRLSLSGQEDDGFDKNRLGADYRDSKRLNRFSLSVSQMLNEQQS
IDWQLNAKEGTNQRPYTYQPVFKDYAEKGYNSDVVAKDYAGSLRWNLDINPQHSLYIQGS
AQHWDRQQTWRACDAAVSFSPELTRLWQLNPYYAERLARNMPSNLSGAPSGTAAERALAS
QIIDQWNAGGQNPVCGNIDQSSRETRYDLELQDTLSLSDNLRLVSGMNYRYDRADSETYF
NGTLDDTTWRLFGQLEWRASEHWLIQGGAMYEDTQLTGNSLTPRIAVNYLINPRHGLRAV
YSEAIRSPDMFENNVNWSYRVTGLSTPVYGQNSAQYFVKTRGPGNLDQEHMRSRELGYNG
YFVDQALNLDIKLFYDEITGMISEPLRNNQYIASNSNASRFAGTESQLDWQLSRADRLRL
TYAYVHAQASNRLDQRLTASNSGSAGWLRNWGQGWSSALFYYGDSALNGYRFERVDTRIA
KRLALGSKTSLELAGTLQQRLDHQPTTFADNLYDSRHVVYFSAELEF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctggcccctcacctcttcgtctgtcgctgctgctgggcatgctgttcggccac
tcggtgctggccgacgatctgttcctggacggcaccgccctgcccgaggtcctcaccgcc
acccgcctgaaacagtcacctgccgcggttcccggcagcatgacggtgctcgacaacgag
ttgatcaaggccagcggcgcccgggacatcagcgaactgctgcgcctggtgccggggatg
atggtcggcgccatcagcggcaaccaggccacggtcaactaccacggcaccaacgccagc
gaagcccggcgcatgcaagtgctgatcgacgggcgttcggtgtatcgcgccggcctggcg
acagtggactggagcgatatcccggtggccatggaagacatcgagcgcatcgaggtgttt
cgcggccccaataccgtcagctacggcgccaacgcgctgatggcggtggtcaacatcatc
acccgcgccccggccaacagccatggcacgcgggtcaagctgacccggggccagcgcggc
atcagcgactggtacgccagccagggtaccggctgggaaaccggcgacctgcgcctgtcg
ctgtcggggcaggaagatgatggcttcgacaagaatcgcctgggggccgactaccgcgac
agcaagcgcttgaaccgcttcagtctgtccgtgagccagatgctcaatgaacagcagagc
atcgactggcaattgaatgccaaggaaggcaccaaccagcggccctatacctatcagccg
gtatttaaagactatgccgagaagggctataactctgacgttgttgccaaggactacgca
ggatctctgcgctggaatctggatatcaatccacaacacagcctttatatacagggctcg
gcccaacactgggaccgccagcagacgtggagggcctgtgacgccgcagtttccttcagc
cctgaactgacacgtctgtggcaactcaacccgtattacgccgagcgcctggcgaggaac
atgccaagtaacttgagcggcgcgccgtcgggaacagcagcggaacgggcactggcaagc
caaatcatcgatcaatggaacgccggtggccaaaatcccgtctgcggcaacatcgaccag
agctctcgggaaacccgctacgacctggagctgcaggacaccctgagcctcagcgacaac
ctgcggctggtcagcggcatgaactatcgttacgaccgggccgactccgaaacctacttc
aacggcaccctcgacgacaccacctggcgcctgttcggccagctggaatggcgggccagc
gaacattggctgatccagggcggggctatgtacgaagacacccagctgaccggcaactcc
ctgaccccgaggatcgcggtcaactacctgatcaacccgcgccacggcttgcgggcggtg
tattcggaagccatccgctccccggacatgttcgagaacaacgtcaactggagctaccgg
gtcaccggcctgagcaccccggtctacggccagaacagcgcccagtacttcgtcaagacc
cgtggccccggcaacctcgaccaggagcacatgcgttcccgggaactgggctacaacggt
tacttcgtcgaccaggcgctgaacctcgacatcaagctgttctatgacgaaatcaccggg
atgatcagcgagccgctgcgcaacaaccagtacatcgccagcaacagcaacgcctcgcgc
ttcgccggtaccgagagccagctggactggcaactgagccgcgccgaccgcctgcgcctg
acctacgcctacgtccatgcccaggccagcaaccgcctggaccagcgcctgaccgccagc
aacagcggctccgccggctggctgcgcaattggggccagggctggtccagcgcgctcttc
tactatggcgacagcgccctcaacggctaccgattcgaacgggtcgacacccgcatcgcc
aagcgcctggccctgggcagcaagaccagcctggaactggccggcaccctgcagcaacgg
ctcgaccaccagcccaccaccttcgccgacaatctctacgactcgcgccacgtggtctac
ttcagcgcggagctcgagttctga
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