Pseudomonas protegens Cab57: PPC_1884
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Entry
PPC_1884 CDS
T03613
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00071
Fatty acid degradation
ppro00280
Valine, leucine and isoleucine degradation
ppro00310
Lysine degradation
ppro00362
Benzoate degradation
ppro00380
Tryptophan metabolism
ppro00410
beta-Alanine metabolism
ppro00640
Propanoate metabolism
ppro00650
Butanoate metabolism
ppro00907
Pinene, camphor and geraniol degradation
ppro00930
Caprolactam degradation
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
ppro01212
Fatty acid metabolism
Module
ppro_M00087
beta-Oxidation
ppro_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PPC_1884
00650 Butanoate metabolism
PPC_1884
09103 Lipid metabolism
00071 Fatty acid degradation
PPC_1884
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PPC_1884
00310 Lysine degradation
PPC_1884
00380 Tryptophan metabolism
PPC_1884
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PPC_1884
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PPC_1884
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PPC_1884
00930 Caprolactam degradation
PPC_1884
Enzymes [BR:
ppro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PPC_1884
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PPC_1884
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PPC_1884
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
UDPG_MGDP_dh_N
F420_oxidored
DUF1731
Motif
Other DBs
NCBI-ProteinID:
BAO61231
LinkDB
All DBs
Position
2059574..2061718
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AA seq
714 aa
AA seq
DB search
MTDAIRYEKGQDQIVVLTIDMPGQSANTMNALYRDAMAGAVARLQAEQESIAGVIITSAK
KTFFAGGDLNELIKVGRPEAKAFYDMVLALKGQLRALETLGKPVVAAINGAALGGGWEIC
LACHHRVALDDKSVQVGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKVRPQQAL
QAGLIDALATDRDDLLAKARAWILANPGAQQPWDVRGYQIPGGTPSNPKVAQMLAIAPSI
LRTKTQGCFPAPEKILCAAVEGAQVDFDTAQLIETRYFTELTTGQVAKNMIGTFWFQLNQ
INAGSSRPQGVPPQVTKKLGVLGAGMMGAGIAYVSAVAGIEVVLKDISPEAAEKGKAHSA
ALLEKKVARGQLSREQRDATLARIRTTAEDADLAGCDLIIEAVFEDRELKAKVSRAAQQV
VGGDAVIASNTSTLPITGLAAAVPNPDKFIGLHFFSPVEKMPLVEIIKGAKTSDETLARG
FDFVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGIAAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRQQTAKDLQAEGKPAIEHPAFAVIDLLLNEYKRPGKAAGGGFYDYP
AGAQKHLWPQLRTRFYKADGQISPQDVRDRLLFVQAIETVRCVEEGVLHSTADANIGSIF
GIGFAAWSGGALQFINQYGVQDFVARAQYLAEQYGERFRPPTLLLEKARLGQLF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccatccgttacgaaaaaggccaggaccagatcgtcgtcctgaccatcgat
atgccgggccagagcgccaacaccatgaatgccctgtaccgcgacgccatggccggtgcc
gtggcgcgcttgcaggccgagcaggaatcgattgccggggtgatcatcacctcggcgaaa
aagaccttcttcgccggcggtgacctcaatgagctgatcaaggtcggcaggcccgaggcc
aaggctttctacgacatggtgctggccctcaagggccagctgcgagccctggaaaccctg
ggcaagccggtggtcgctgcaatcaatggcgcggccctgggcggcggctgggaaatctgc
ctggcctgccatcatcgcgttgctctggacgataaatcggtacaggtcggcctgccggaa
gtcaccctgggcctgttgcccggcggcggcggggtggtgcgcatggtgcgcatgctgggc
ctggaaaaggctctgccctatttgctggaaggcaagaaagtgcgcccgcagcaggcgttg
caagcaggcctgatcgatgccctggcgacggaccgcgacgacttgctggccaaggctcgg
gcctggatcctagccaacccgggcgcgcagcagccctgggatgtgcgcggctaccagatc
cctggtggcacgccgtcgaacccgaaggttgcgcagatgctggccatcgccccatcgatt
ctgcggaccaagacccagggttgcttccccgcgccggaaaagatcctctgcgctgccgtc
gaaggcgcccaggtggatttcgacaccgcgcaactgatcgagacccgttacttcaccgag
ctgaccacaggccaggtggcgaagaacatgatcggcaccttctggttccagctcaaccag
atcaatgccggcagctcacggccacagggcgtgccgccgcaagtcacgaaaaagctcggg
gtgcttggcgccggcatgatgggcgcgggcattgcctatgtcagtgcggtggcgggtatc
gaggtggtgctcaaggacatcagccccgaggcggccgagaagggcaaggcccactcggcg
gcgctgctggagaaaaaggtggctcgcgggcagttgagccgcgagcagcgggacgccacc
ctggcgcggatccgcaccaccgccgaggatgccgacctggccggttgcgacctgatcatc
gaggcggtgttcgaggatcgcgagctcaaggccaaggtctcccgggctgcgcagcaggtg
gtcggcggtgacgcggtgatcgcctccaacacttcgaccctgcccatcaccggcctggct
gcggcggtgccgaacccggacaagttcatcggcctgcatttcttcagcccggtggaaaaa
atgcccctggtggaaatcatcaagggggcgaaaaccagcgatgaaaccctggcccgcggc
ttcgactttgtcttgcagatcaagaagaccccgatcgtggtcaatgacagccgtggcttc
ttcacttcccgggtgttcggcacttttaccaacgaaggcatcgccatgctcggcgagggc
atcgcggcgccgatgatcgagaccgaagcgcgcaaggccgggatgccggtggggccgctg
gcaatttccgacgaggtttccctgagcctgatgagccatatccgccagcagaccgccaag
gacctgcaggccgagggcaagccggccatcgaacacccggcatttgccgtgatcgacctg
ctgcttaacgaatacaagcgcccgggcaaggcggccggtggcggtttctacgattatccg
gccggtgcccagaaacatttgtggccgcagttgcgcacgcgcttctacaaggccgacggg
cagatctcgccccaggatgtgcgggatcgcctgctgttcgtccaggccatcgagaccgtg
cgttgtgtggaggagggagtgttgcactccacggcggacgccaacatcggctcgatcttc
ggtatcgggtttgccgcctggagcgggggcgccctgcagttcatcaatcagtacggggta
caggatttcgtcgcccgtgcgcagtacctggccgagcaatatggcgaacgtttccggccg
ccgacgctgcttctggaaaaggctcgcctgggccagttgttctga
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