Pseudomonas protegens Cab57: PPC_2024
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Entry
PPC_2024 CDS
T03613
Name
(GenBank) superfamily II DNA/RNA helicase, SNF2 family
Organism
ppro
Pseudomonas protegens Cab57
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAO61371
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Position
complement(2228720..2231410)
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AA seq
896 aa
AA seq
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MTPPLTKPLAPSWVNRFKEQALERGRRYALEKRVRIATAGDSAITASCEGSGGTMYRQTI
TLRESSKGNLLLIDAHCTCPVRSNCKHIAAVLLQVEETLAYPAAAQDAELLEKLSAVLDS
RRPAALPQVLLEDVRPVPRLWVASIEFSAFEPRNGKMQRYIQHRAALSFNYRGEYASGQK
NTDVIIRQEHQSLRIKRQPELEQGWREQLRGLGFKIATRQSKALPESAGELFEMVNDSAW
LTFTLNELPKLRSQDWELQIDEGFGFDLTAVDDWYASVDEAPGRDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPERLAKRRDDELILVNIPNRPNSLHGPLQVALPYGRLKPVLA
TLGEFYLQEPGDTTLRLSSADATRLNPLQDLPLLWEGGEHIRTFAQRLRDIRDYSAPAPQ
GLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRLDRPCMV
VMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAQLGDYDLLLTTYALLPKDIELLAA
QPLHVLILDEAQYIKNPSSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWL
GDAKSFNRDYRVPIEKHASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNE
AQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDSPTTRGSS
SGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEAELKRRNIAYALLTGQTRDRRTPVR
DFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATESQATDRAYRIGQEKPVFVY
KLIARGTVEEKIQHLQQEKSDLAAGVLDGRKAGDWKLQSDDIEALFAPLPDNKGGR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcccctgaccaaacccctggccccctcctgggtcaaccgcttcaaggaacaa
gccttggagcgtggccggcgctacgccctggaaaaacgcgtgcgcatcgccacggctgga
gacagcgctatcaccgccagttgtgaaggctccggtggcactatgtaccggcagaccatc
accctgcgcgaatcgagcaagggcaacctgctgctgatcgacgcccactgcacctgccca
gtacgcagcaactgcaagcacatcgctgcggtgctgctacaagtggaggaaaccctggcc
tacccggcggctgcccaggacgccgaactgctggaaaagctctccgcagtcctcgacagt
cgtcgccccgccgccctgccccaggtactgctggaggacgtgcgcccggtgccgcggctg
tgggtggcaagcatcgaattcagcgccttcgaaccgcgcaacggcaagatgcagcgctac
atccagcaccgcgccgcactgtcgttcaactataggggcgaatacgccagcgggcagaag
aacaccgatgtgatcatccgccaggaacaccagagcctgcgcatcaagcgccagcccgag
ctggaacagggctggcgcgagcaattgcgaggcctgggcttcaagatcgccacccggcag
agcaaggcactgccggaaagcgccggcgagctgttcgagatggtcaacgacagcgcctgg
ctgaccttcaccctcaacgagctgcctaagctgcgcagccaggactgggagctgcagatc
gacgagggcttcggcttcgacctgacggcggtggacgactggtacgccagtgtcgacgag
gccccgggccgcgactggttcgacctggaactggggatcatcgtcaacggcgagcgcttg
agcctgctgccgattttgctcaacctgatgcgctcgcacaccgagatcctcaatccggag
cgcctggccaagcgccgcgacgacgagctgatcctggtgaacattcccaatcggcccaac
tccctgcatggcccgctgcaagtggcactgccctatggccgcctgaagccggtactggca
accctgggcgagttctatctgcaagaacccggcgataccaccctgcgcttgagcagcgcc
gacgccacccgcctcaacccgttgcaggacctgccactgctctgggaaggcggcgaacac
attcgcaccttcgcccagcgcctgcgggacatccgcgactactcggcaccggcgccccag
ggcctgaatgccaccctgcgcccctatcagctcgaaggcctgagctggatgcagtcactg
cgccaactggaagtgggcggcatcctggccgacgacatgggcctgggcaagaccctgcaa
accctggcgcacatactcagcgagaagaacgccgggcgcctggaccgcccctgcatggtg
gtaatgcccaccagcctgattcccaactggctggacgaggccgcgcacttcaccccgcag
ctcaaggtgctggcgctgtatggcgccgggcgcaagaaacacttcgcccaactgggcgac
tatgacttgctgctgaccacctatgcgctactgcccaaggacatcgaactgctggcggcc
cagcccctgcatgtgctgatcctcgatgaggcgcagtacatcaagaatccgtcgagcaag
gccgcccaggctgctcgggaactcaatgctcggcagcgcctgtgcctgtccggcacgccg
ctggaaaaccatctgggggagctctggtcgctgttccacttcctcttgccgggctggctc
ggcgatgccaagagcttcaaccgtgactaccgggttccgattgaaaagcacgccagcgaa
gtgcgcctgcagcacctcaacggccggatcaagcccttcctgctgcgccgtaccaaggag
caggtggccaccgagctgccgcccaagaccgagatcatccactgggtcgaactcaacgag
gcgcagcgtgatgtctacgaaaccatgcgcctggccatggacaagaaagtgcgcgacgaa
atcactcgcaaaggtgtggcgcgcagccagatcatcattcttgaagccctgctcaaactg
cgccaggtgtgttgcgacctgcgcctggtcaacgactcgccaacaacacggggcagctcc
tcaggcaagctcgacagcctgatggaaatgcttgaagaactgttcgaagaggggcggcgg
attctgctgttctcgcagttcacctcgatgctgagcctgatcgaggccgagctgaaacgg
cgcaacatcgcctacgccttgctcaccggccagacccgggaccggcgcactccggtacgg
gacttccagagtggcaagctgcagattttcctgatcagtctcaaggccggtggtgtcggc
ctcaacctgaccgaagccgatacggtgattcactacgacccttggtggaacccggccacc
gagagccaggccaccgaccgcgcctatcgcatcggccaggaaaagcccgtgttcgtctac
aagctgattgcccgaggtacggtggaagaaaagatccagcacctgcagcaggaaaaatcg
gacctggcggcaggcgtacttgatgggcgcaaggccggtgactggaagctgcagagcgac
gacatcgaagccttgttcgccccactgccggacaacaagggcggccgctga
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