Pseudomonas protegens Cab57: PPC_2367
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Entry
PPC_2367 CDS
T03613
Name
(GenBank) regulatory protein, LysR substrate-binding protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_2367
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_2367
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BAO61714
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All DBs
Position
2616403..2617305
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AA seq
300 aa
AA seq
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MTVKQIRAFLAVAHSLSFALACERLHLSQSALSLTIKALEEGLGGRLFTRNTRNVALTPE
GEALLPLARRLIADWDNAEDELRQRFTLQRGRVTLAAMPSFAGNLLPPILKHFRARYPQV
NVTVNDVVNEQVLEMVRDREVELGVAFEPQDSTSLVFTPLYIDRFVAVVPRDSPLARRSE
IDWQALLQEPFITLQRPSTVRVMLEDHLRARGVQLPVEFESHQLATVGRMVASGLGVSAV
PALCAQQMRELGGHCLTLHDPVVERAIGVLTKPGDELSTAAQALFDILREENLGQRLALL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaaacagatacgggcatttctggccgtggcccacagtttgagctttgccctg
gcctgcgaacggctgcacctgtcgcagtcggccctgagcctgacgatcaaggcgctggag
gaaggtctgggtgggcgcctgttcacgcgcaatacgcgcaatgtggccctgaccccggaa
ggcgaggccctgctgcccctggcgcggcgtctgatcgccgactgggacaacgccgaggac
gaactgcgccagcgtttcaccctgcagcgaggccgggtgaccctggcggcgatgccgtcc
tttgccggcaacctgctgccgccgatcctcaagcactttcgggcccgctatccccaggtc
aacgtcacggtcaacgacgtggtcaacgagcaggtgctggagatggtccgtgatcgcgag
gtggagctgggggtggcgttcgagccccaggacagcacctcgctggtgttcaccccgctg
tacatcgaccgctttgtcgccgtggtgccccgggattcgcccctggcccggcgcagcgag
atcgactggcaggcgctgttgcaggagcccttcatcaccttgcagcggccgtccacggtg
cgggtgatgctcgaagatcacctgcgggcacggggcgtgcaactgccggtggagtttgaa
agccaccagttggcgaccgtggggcgcatggtcgccagcggcctgggggtgagtgcggtg
ccggcgctgtgcgcccagcagatgcgcgagctgggcgggcactgcctgaccctgcacgat
ccggtggtggagcgggccattggtgtactgaccaagccgggggacgagctgtccaccgcg
gcccaggcgctgttcgacatcctgcgcgaggaaaacctcggccagcgcctggcgctactc
tga
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