KEGG   Pseudomonas protegens Cab57: PPC_2583
Entry
PPC_2583          CDS       T03613                                 
Symbol
dapF_1
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro00300  Lysine biosynthesis
ppro00470  D-Amino acid metabolism
ppro01100  Metabolic pathways
ppro01110  Biosynthesis of secondary metabolites
ppro01120  Microbial metabolism in diverse environments
ppro01230  Biosynthesis of amino acids
Module
ppro_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PPC_2583 (dapF_1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PPC_2583 (dapF_1)
Enzymes [BR:ppro01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PPC_2583 (dapF_1)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BAO61930
LinkDB
Position
complement(2833092..2833886)
AA seq 264 aa
MPLNFVKMHANGDDFVLIDARGRTNPITRELARALGDRRRGIGFNQLVVLGDCSDSAAQL
TFFNADGSSLDTCGSATRGAADLLMQESGVTSVQVKTARGLQQCLRLEDRSVSVEMGLPS
FDWQSIPLARELDSLHLPLPGTPAACSMGNPHCSFFVDDLEQLDIATLGPQIENHPLFPH
KTNVHFIQVIDRQTIRLRIWERNGTIPLGSGSCSCAAAVNGIRRGLLDSPVRVLCDGGPV
TVSWDGQGKVRLAGSVTRVFSGSL
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccctgaactttgtgaagatgcacgccaatggtgacgacttcgtgctgatcgatgcc
cgtggccgcaccaacccgatcacccgcgagctggccagggccctgggggaccgccggcgt
ggcatcggtttcaatcagttggtggtgctcggcgattgcagcgacagcgcggcgcaactg
accttcttcaacgccgatggttccagcctggacacctgcggcagtgccacccggggcgcc
gccgacctgctgatgcaggaaagcggcgtcacctcggtgcaggtgaaaaccgcccgcggc
ctgcagcaatgcctgcgccttgaggatcggtcggtgtcggtggaaatgggcctgccttcg
ttcgactggcagtccatccccctggcccgagagctggacagcctgcacctgccactgcct
ggaacaccggcggcgtgcagcatgggcaacccccattgcagttttttcgtcgacgatctg
gaacagctggacattgccacgctgggcccacagatcgagaaccacccgctgtttccgcac
aagaccaatgtgcatttcattcaggtgatcgaccgccagaccattcgtctgcgcatctgg
gagcgcaatggcaccatccccctgggttccggctcctgctcctgcgcagcggcagtcaac
ggcatccgccgcggcctgctggacagcccggtgcgggtgctgtgcgatggcgggccggtg
acggtgagctgggacggccagggcaaggtgcgcctggccggcagcgtgacccgggtgttc
agtgggtcactgtga

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