Pseudomonas protegens Cab57: PPC_2776
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Entry
PPC_2776 CDS
T03613
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_2776
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PPC_2776
Archaeal homologous recombinant proteins
PPC_2776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
cobW
RsgA_GTPase
AAA_22
nSTAND3
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BAO62123
LinkDB
All DBs
Position
complement(3031482..3035126)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEILTSDPRTLLRRGTGSGYAEVDFVGIDGRRYRARWETNRARDKA
TGKLQGSRQNLTDLDSEQLLSNQSKSEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTAVYSQLGRRAYSKSKEAEDAHKELKAQASGISPLEPEARAELEQQ
LSQAQQQLKEQQAQLRQLEAQHVWLKELRQWQEARQSAAEQLQAAEQDAQALAPERLRLQ
RLEQLAPQRHQFLRQAELGASLPPLRQQIQQQVEQQGALQQQQERLQQQLQDAGTALSQA
QEQHSTSAPLLREAFAEQANLERLGQSLAQAEAQRSRAEQASTEGQQGIQQLLEKQRLVG
ERLERIAGQLAHSVALAPLSDAWNAYRERLQQLMLIGNRLHQGQAELPALEQRASSAAQQ
LSEQRTQLELLYSEAGAEPQAVAEQIQLLGTLLQDNRKQQRAVEELARLWAQQRELDQRG
QALQDRQQAVAAQREELNKVGLQAKAELVVAEQTLSVTQALLERQRLARSASVEELRGQL
QSDQPCPVCGSVEHPYHQPEALLQSLGRHDENEEASARKTVDSLKEQLNELRAQVQGLIA
QQKEFLQQQEQLASQQQALAPSLQAHPLSASLLDQDPPKRDAWLQQQLAQLQQSITQDEN
RQGVLLTLQKDAARLQNQLQAAIDASQQAAQHLDKQQQQLSADRQRLDEELASFSHLLPA
EVLDGLRRDPASTFMQLDQQVLQRIEQLREQQEEAEEQQQRQLTLEKEQDRQLTRQQQLA
EAQQQFDTLHQQQQACQHRLAELLGQQPSAEHWQQHLEQAVDQARSALALAQQQQQALHQ
QAIELGAELKAREERLQALESEQQQLAASIEQWRAGHPELDDAGLQQLLELDEEQVQQLR
QRLQDNDKAIEQAKVLLQERQQRLEQHQAQHNGNLETEQLAQALEQLQQQAQASEQQVAD
LRARQSEDQRRQAANQALNQRLEQAYAQWQRWARLSALIGSAEGDKFRKIAQAYNLDLLV
HHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIK
VSRQGNGLSTLEVK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaagaacctggcctccctggccggccccttcgagatc
gacttcaccgccgagcccctggccagcgccgggctgttcgccattaccgggcccaccggc
gccggcaagagcaccctgctggatgccctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaatatcggccgcgagaccaaggtccccgaggtcgacagcgagatcctcaccagc
gacccgcgcaccctgctgcgccgcggcaccggcagcggctatgccgaggtggactttgtc
ggcatcgacggccgtcgctaccgcgcccgctgggaaaccaaccgcgcccgcgacaaagcc
accggcaagctgcaaggcagccggcagaacctcactgaccttgacagcgaacagctgctg
agcaaccagagcaagagcgaatacaagcaactgatcgaggcccgcctggggctcaacttc
gaacagttcacccgggcggtgatgctggcccagagcgagttcagcgcctttctcaaggcc
gacgacaaggaacgcagcgagctgctggaaaagctcaccaacactgcggtctacagccag
ttggggcgccgcgcctacagcaagagcaaggaggccgaagacgcccacaaggagctcaag
gcccaggccagcggcatcagcccgctggagcccgaggcccgggccgagcttgaacagcag
ttgagccaggcccagcaacagctcaaggagcaacaggcccagctcaggcagttggaagcc
cagcacgtctggctcaaggaactgcgccaatggcaggaagcccggcagagcgccgccgaa
caactgcaagcggccgaacaggacgcccaggccctggccccggagcgcctgcgcctgcaa
cgcctggagcaactggcgccgcagcggcaccagttcctgcgccaggcagagctgggcgcc
agcctgccgccgttgcgccagcagatccagcagcaggtcgaacagcaaggcgccctgcaa
caacagcaggaacgcctgcaacagcaactgcaggacgccggcacggccctgtcccaggcc
caggaacagcacagcaccagcgccccgttgctgcgcgaagcctttgccgaacaggccaac
ctggagcgcctggggcagagcctggcccaggccgaggcccaacgcagccgcgccgagcag
gccagcaccgaaggccagcaaggcatccagcaactgctggaaaaacagcgcctggtgggc
gaacgcctggagcggatcgccgggcaactggcccacagcgtcgccctcgcccccttgagc
gacgcctggaacgcctaccgcgaacgcctgcaacagctgatgctgatcggcaatcgcctg
caccagggccaggccgaactgccggccctggaacagcgcgccagcagcgccgcccagcaa
ctgagcgagcaacgcacgcagctcgaactgctctacagcgaagccggggccgagccccag
gcggtggccgagcagatccagttgctcggcaccctgctccaggacaaccgcaagcagcag
cgcgccgtcgaagagctggcccggctctgggcccagcaacgcgaactggaccagcgcggc
caggccctgcaggacaggcagcaggcggtggccgcccagcgcgaggagctgaacaaggtc
ggcctgcaggcgaaggccgagctggtggtggccgagcagaccctgagcgtcacccaggcc
ctgctggagcgccagcggctggcccgcagcgccagcgtcgaggagttgcgcgggcaattg
cagagcgaccagccgtgcccggtgtgcggcagcgtcgagcacccctaccaccagcctgaa
gccttgctgcagagcctcgggcgccacgacgagaacgaggaagccagcgcccgcaagacg
gtggacagcctcaaggaacagctcaacgaactgcgggcccaggtccaggggctgatcgcc
cagcagaaggaattcctccagcagcaggaacagctggcgagccagcagcaggccctggcc
ccgagcctgcaagcccaccccttgagcgccagcctcctggaccaggacccgcccaagcgc
gacgcctggctgcaacagcaactcgcccagctgcagcagagcatcacccaggacgaaaac
cgccagggcgtcctgctgaccctgcaaaaagatgccgcgcgcctgcaaaaccagctgcag
gcggcaatcgacgccagccagcaggccgcccagcacctggacaagcaacagcagcaactg
agcgccgaccgccagcgcctggacgaggaactggccagcttcagccacttgctgccggca
gaggtcctcgacggcctgcgccgcgacccggccagcaccttcatgcagctcgaccagcag
gtgctgcaacgcatcgagcaactgcgcgagcagcaggaagaggccgaagaacagcaacag
cgccagctgaccctggaaaaggaacaggaccgccagttgacccgccagcagcaactggcc
gaggcccaacagcagttcgacaccctgcaccagcagcaacaggcctgccagcacaggctc
gccgagctgctgggccagcagcccagcgccgagcactggcagcagcacctggagcaagcc
gtggaccaggcccgcagcgccctggccctggcccagcaacagcagcaggcactgcaccag
caagcgatcgagttgggcgccgagctcaaggcccgggaagaacgcctgcaagccctggaa
agcgaacaacagcaactggccgccagcatcgagcagtggcgcgccgggcacccggaactg
gatgacgccggcctgcaacagctgctggagctggacgaagaacaggtgcagcaactgcgc
cagcgcctgcaagacaacgacaaggccatcgagcaggccaaggtcctgctgcaggaacgc
cagcagcgcctggaacagcatcaggcccagcacaacggcaacctggaaaccgaacaactg
gcccaggccctggaacagctgcagcaacaggcccaggccagcgaacaacaggtggcggac
ctgcgtgcacggcaaagcgaggaccagcgccgccaggccgccaaccaggccctcaaccaa
cgccttgaacaggcctacgcccagtggcagcgctgggcccggctcagcgccctgatcggc
tcggccgaaggcgacaagttccgcaagatcgcccaggcctacaacctcgacctgctggtg
caccacgccaacgcccaactgcgccaactggtgcgccgctaccgcctcaagcgcggtggc
agcatgctcggcctgctggtgctggacaccgaaatgggcgacgaactacgctcggtgcac
tcgctgtccggcggcgaaaccttcctggtgtccctggccctggccctggggctggcctcc
atggcttccagcaccctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctc
gaccccgagtccctgcaactggccatggatgccctcgacggcctgcaggcccagggccgc
aaggtggcggtgatctcccacgtacaggaaatgcatgaacggattccggtacagatcaag
gtcagccgccagggcaatggcctgagcaccctggaggtgaaatga
DBGET
integrated database retrieval system
