Pseudomonas protegens Cab57: PPC_2777
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Entry
PPC_2777 CDS
T03613
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_2777
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PPC_2777
Archaeal homologous recombinant proteins
PPC_2777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Flavi_M
Motif
Other DBs
NCBI-ProteinID:
BAO62124
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All DBs
Position
complement(3035123..3036367)
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLKHEQPDVLLIAGDIFDTVNPPVSAQ
ERLYDFIVSAHEQQPALTVVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPDASGQVAAWCLALPFLRPAEVTGRQLGDDYLKGIAQVHEWLIAAANAKRQPG
QALVAVSHAHMAGGSVSEDSERSLIIGNAEALPASLFGPDISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVRLDGETLVSVEPRLIPRAVNLQRLGPAPLGELLTQL
GELPDIDLLAEEQRQPWLEVRVRLDEPQPDLRQQVESALQGKAVRLVRIAAEYAGKGAGD
GEEASAELIELDQLTPEELFRRAWRDAYANEVDEATLKDFALLLQDVQQEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccagaacctccacggccaggaacgc
gacttcgaacacgcctgtttcctggagtggctgctgcgccagctcaagcacgaacagccc
gatgtgctgctgatcgccggcgatatcttcgacaccgtcaacccgccggtcagcgcccag
gagcggctctacgacttcatcgtcagcgcccacgagcagcagccggccctgaccgtcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgagctgccggcgcccctgatgcgc
cgcctgcgcacccacgccctgggccgggtgctgtggctggacgacggccagctggacgcc
gagcgcctgctgctgccgctgcccgacgccagcggccaggtcgccgcctggtgcctggcc
ctgccgttcctgcggccggcggaagtcaccggccgccagctgggcgacgactacctcaag
ggcattgcccaggtccacgaatggctgatcgccgcggccaacgccaagcgccagccgggc
caggccctggtcgccgtcagccatgcgcacatggccggcggctcggtctcggaagattcc
gaacgcagcctgatcatcggcaacgccgaggccctgcccgccagcctgttcggcccggac
atcagctacgtggccctgggccacctgcacaagccgcagaaggtcaacggcgaggagcgc
atccgctacagcggctcgccgatcccgctgtcgttttccgagatcggctatcagcaccag
atcctcgacgtgcgcctggacggcgagaccctggtcagcgtcgaaccgcggctgattccc
cgcgcggtgaacctgcaacgcctgggcccggcgcccctgggggaactcctgacccagctc
ggcgagctgccggacatcgacctgttggccgaggagcagcgccagccctggctggaagtg
cgggtgcgcctggacgagccccagccggacctgcgccagcaagtggaaagcgccctgcaa
ggcaaggccgtgcgcctggtgcggatcgccgccgaatacgccggcaagggcgcaggtgac
ggtgaagaggccagtgccgagctgatcgagctggaccagctgacccccgaagaactgttc
cgccgcgcctggcgcgacgcttacgccaacgaggtggacgaagccaccctcaaggatttc
gccctgctgttgcaggacgtccagcaagaaggtgaacagccatga
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