Pseudomonas protegens Cab57: PPC_2828
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Entry
PPC_2828 CDS
T03613
Name
(GenBank) TIGR03549 family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_2828
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
ribosomal protein modification factors
PPC_2828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BAO62175
LinkDB
All DBs
Position
complement(3102303..3104522)
Genome browser
AA seq
739 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQT
GPEFIIEEVENLDADAQALLMPQSGSSEGTYIAGKDLPLEQTIANMSGILAGLGMKIEIA
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPNERWFQPGRKDELPKEILDEHCLAIYNPDGELRGSHLYDTNSGNIERGIC
CLPYVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGEM
ALPDVPQEVLAKYPSILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFESQALMEPNNFVEHFIDSSGVVSWRF
FSAKADFEFVEWDFTSQGSSGERAAANAEEAATLFGILEGLGKEVYMAVYEHLGATACRI
LVPDYSEIYPVDDLIWDNTNKALFFREDILNLHSLDEDGLRSLVERLEESELDDYTDITT
LIGIEFDDNTAWGQLTILELKLLIHVALGQFDPAKELVEMFLQYNDNTVERGLFYQALNA
VLEVELDDELELGDYEANLRRMFGNERMNAVIGSVQGSVRFYGLTPTNLQLEGLDRHLRL
IDSYKKLHAARAKWSAANR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtggtggccgaccaacctatccgctacaagggcgatggttcggcgccggggccgttc
gattatttcctggcttcttcggcgctgtgcgcggcgtacttcgtcaagctgtactgccag
acccgcaatatccccaccgacaatatccgcctgtcgcagaacaacattgtcgatccggaa
aaccgctacaaccagatcttcaagatccaggtcgagctgccggcggacatcagcgacaag
gaccgtcagggcatcctgcgttccatcgaccgttgcacggtgaagaaggtggtgcagacc
ggccccgaattcatcatcgaggaagtggaaaacctcgacgccgatgcccaggcgctgttg
atgccgcaatcgggctccagcgaaggcacctacattgccggcaaggacctgcccctggag
cagaccatcgccaacatgtccgggatcctcgcgggcctggggatgaagatcgaaatcgct
tcgtggcgcaatatcgtgcccaacgtctggtcgctgcatatccgtgatgctcagtcgccg
atgtgcttcaccaacggcaagggcgccaccaaggaaagcgccctggcctcggccttgggc
gagttcatcgagcgcctgaactgcaacttcttctacaacgatcagttctggggcgaagag
atcgccaacgccgagttcgtgcattacccaaacgagcgctggttccagccggggcgcaag
gatgagctgcccaaagagatcctcgacgagcactgcctggccatctataacccggatggc
gagctgcgcggctcccatctgtacgacaccaactcgggcaatatcgagcgcggcatctgc
tgcctgccttacgtgcgccagtccgacggcgaggtggtgtacttcccctccaacctgatc
gagaacctgtacctgagcaacggcatgagcgccggcaacaccctggccgaagcccaggtg
cagtgcctgtcggagatcttcgagcgggcggtaaagcgccagattctcgaaggcgagatg
gccctgccggatgtgcctcaggaagtgctggccaagtacccgagcattctggccggcatc
cagggcctggaagaacaaggctttccggtgctggtcaaggatgcgtccctgggtggtgag
ttcccggtgatgtgcgtgaccctgatgaacccgcgcaccggcggcgtgttcgcctcgttc
ggcgcccacccaagcttggaggtggcgctggagcgcagcctcaccgaactgctccagggc
cgcagtttcgaaggcttgaacgacctgccgcagccgaccttcgaaagccaggcgctgatg
gagccgaacaacttcgtcgagcacttcatcgactccagcggcgtagtgtcgtggcgtttc
ttcagtgccaaggcggatttcgaattcgtcgagtgggacttcaccagccagggcagcagc
ggtgaaagagcggcggccaacgccgaggaggccgcgaccctgttcggcatcctcgagggc
ctgggcaaggaagtctacatggcggtgtacgaacacctgggggccacggcctgccgcatc
ctggtgccggactactcggaaatctacccggtggacgacctgatctgggacaacaccaac
aaggcgctgttcttccgtgaagacatcctcaacctgcacagcctggacgaagacggccta
cgctcgctggtggagcggctggaagaaagcgaactggacgactacaccgacatcaccacc
ctgatcggcatcgagttcgacgacaacaccgcctggggccagttgaccatcctggagctg
aagctactgatccacgtggccctggggcagttcgacccggccaaggagctggtggagatg
ttcctgcaatacaacgacaacaccgtcgagcgcgggctgttctaccaggccctgaatgcg
gtgctggaagtggagctggacgacgagctggagctgggcgactacgaggccaacttgcgg
cgcatgttcggcaacgaacggatgaacgcggtgatcggctcagtgcaaggcagcgtgcgc
ttctacggcctgaccccgaccaacctgcagctcgaaggcctggaccgccacctgcggctg
atcgacagctacaagaagctgcacgcagcgcgagccaagtggagcgcagcaaaccgctga
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