Pseudomonas protegens Cab57: PPC_2974
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Entry
PPC_2974 CDS
T03613
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00061
Fatty acid biosynthesis
ppro00071
Fatty acid degradation
ppro01100
Metabolic pathways
ppro01212
Fatty acid metabolism
ppro02024
Quorum sensing
ppro04146
Peroxisome
Module
ppro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPC_2974
00071 Fatty acid degradation
PPC_2974
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PPC_2974
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_2974
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppro01004
]
PPC_2974
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppro04147
]
PPC_2974
Enzymes [BR:
ppro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPC_2974
Lipid biosynthesis proteins [BR:
ppro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PPC_2974
Exosome [BR:
ppro04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPC_2974
Exosomal proteins of breast cancer cells
PPC_2974
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO62321
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All DBs
Position
3283517..3285220
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AA seq
567 aa
AA seq
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MSVVSLQPVERIWLNAYLPGVPSDIEAEIDRYPSLREVFLEHVDKYRQRVAYVSIGTEMG
YDLWEKRVFAFAAWLQSKGVKKGDRVALMMPNCLQYPICLFGTLLVGAVVVNVNPLYTAH
ELRHLLKDSGAETVVIFENFAHTLEQAMPGSQLKNIVVAAIGDLLGTFKGAALNFALRHV
QKQVPKFNLPGAIRFPAMMKLASVLEHRPVELKQDDIAFLQYTGGTTGDAKGAMLTHRNI
LANLMQAKAWVGDQLDENQQETNVTLLPLYHVLSLTVNCLMFMCLGGRNILIANPRDVKR
VQMILRKEKFSGIVGVNTLFNGLLENEEFRGRDFSDLKLAIAGGMATHTSVARRWKEVTG
VPIIEGYGLTECSPVVSISPIDIARMREGDFTGTIGVPLPSTWVRFVREDGQLAELGEEG
ELQVRGPQVMKGYWQRPEETAKVLDRHGWLSTGDVGVMNEQGFIRLVDRKKDMILVSGFN
VYPNEIEDVVALHPGVAEVAAIGVEDDVTGEKVKIFVVRKDPALTQDQLLAHCREYLTGY
KVPRYVEFRTQELPKTTVGKVLRRALR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgtgagcctgcaacccgtcgagcgtatctggctgaacgcttacctgccggga
gtgcccagcgatatcgaagccgagatcgaccgttacccgtcgctgcgggaagtgttcctc
gaacacgtggacaagtatcgccaacgggtggcctatgtgagcatcggcaccgagatgggc
tacgacctgtgggagaagcgggtattcgctttcgccgcctggttgcagtccaagggggtg
aagaagggcgaccgggtggcgttgatgatgcccaactgcctgcagtacccgatctgcctg
ttcggcaccctgctggtgggggccgtggtggtcaacgtcaacccgctgtacacggctcac
gaactgcggcacctgctcaaggacagcggcgccgagaccgtggtgatcttcgagaatttc
gcccacaccctggaacaggcgatgccgggcagccaattgaagaacatcgtggtggccgcc
atcggtgacctgctgggcaccttcaagggcgcagccctgaacttcgccttgcgccatgtg
caaaagcaggtgccgaaattcaacctgccgggggccatccgctttccggcgatgatgaag
ctggccagcgtgctggagcaccgcccggtggaactcaagcaggacgacatcgccttcctg
caatacaccggcggcaccaccggcgatgccaagggcgccatgctcacgcaccgcaacatc
ctcgccaacctgatgcaggccaaggcctgggtcggtgaccagctggacgagaaccagcag
gaaaccaacgtcaccctgttgccgctgtaccacgtgctgtcgctgacggtgaactgcctg
atgttcatgtgcctgggcgggcgcaacatcctgatcgccaatccgcgggacgtgaagcgg
gtgcagatgatcctgcgcaaggaaaagttcagcggcatcgtcggggtcaacaccctgttc
aacggcctgctggaaaacgaggagtttcgcggccgggatttctccgacctgaagctggcg
attgcgggcggcatggccacccacacctcggtggcccggcgctggaaggaagtcaccggg
gtgccgatcatcgaaggctacggcctgaccgagtgctcgccggtggtgagcatcagcccg
atcgacattgcgcgcatgcgcgaaggcgatttcaccgggaccatcggcgtaccgctgcct
tcgacctgggtgcgcttcgtgcgcgaggacggccaactggccgagctgggcgaggagggc
gagctgcaggtacgcgggccgcaggtgatgaagggctactggcagcgcccggaggaaacc
gccaaggttctggaccgccacggctggctgtccaccggggatgtcggggtgatgaacgag
cagggcttcattcgcctggtggaccgcaagaaggacatgatcctggtctccggtttcaac
gtgtaccccaacgagatcgaggatgtggtggccctgcaccccggggtggcggaagtggcg
gcgattggcgtcgaggatgatgtgaccggcgagaaagtgaagatcttcgtcgtgcgcaag
gacccggcgctgacccaggaccagttgctggcccactgccgggaatacctcaccggctac
aaagtgccgcgctatgtagagttccgtacccaagagctgcccaagaccaccgtgggcaaa
gtcctgcgccgcgccctgcgctga
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