Pseudomonas protegens Cab57: PPC_3002
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Entry
PPC_3002 CDS
T03613
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein protein DPRP
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_3002
Enzymes [BR:
ppro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PPC_3002
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PPC_3002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BAO62349
LinkDB
All DBs
Position
complement(3316190..3317737)
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AA seq
515 aa
AA seq
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MVAVSSAGRLGLVLGDQLSFDLAMFEALDPACDALLMAEVDSEARYVRHHPQKIVLIFSA
MRHFAERLREQGWRVIYVKLDDPDNSGSLPGELRRWQAALGVDQVHVTECGEWRLEQALR
DCGLPMTWHVDRRFLCSREQFRHWAAARPSLRMEFFYREMRKQSRLLLEPDGRPCGGTWN
LDADNRKALPRGLRGPFQARFAHDRITREVLQLVGQRFSDHYGDVEQFDYPVTHEQAQEL
WRHFLDFSLAAFGDYQDAMAEGEPFLFHARISAALNIGLLDVRLLCRDVERAYREKRVAL
NAAEGFIRQLIGWREYVRGIYWLRMPEYAELNGLGNTRALPEFYWSGATDMRCLSQVIRQ
TLELGYAHHIQRLMVTGNFALLAGIAPKAICDWYLAVYLDAFDWVELPNTLGMVMHADGG
YLGSKPYCASGRYIQRMSNYCGGCRYRVDQATGNDACPFNALYWHFLMRHETQLGSNPRL
AISYRNLQRMDEPRREAIWQRGEELLARLDAGQAL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccgtctcctctgccgggcggctgggcctggtgctcggcgaccagttgtcgttc
gacctggcaatgttcgaggcgctggacccagcctgcgacgccctgctgatggccgaggtc
gacagcgaagcgcgttatgtccgtcatcatccgcagaaaatcgtgctgatcttcagtgcc
atgcgccacttcgccgagcgcttgcgcgagcaaggctggcgggtgatctacgtgaagctg
gacgatcccgacaacagcggcagtctcccgggcgagctgcgacgctggcaggcagccctt
ggcgtggatcaggtgcatgtcaccgagtgcggcgaatggcggctcgaacaggcgctgcgc
gattgcggcctgcccatgacctggcatgtggaccgacgtttcctctgctcacgggagcag
ttccgccactgggccgccgctcgcccgtcgttgcgcatggagttcttctaccgcgagatg
cgcaagcaaagccgcctgttgctggaacccgatggccgcccctgcggcggcacctggaat
ctcgacgccgacaaccgcaaggccctgcctcgcggcctgcgcggcccctttcaggcccgc
ttcgcccacgaccggatcacccgcgaggtgctgcagctggtgggccaacgcttcagcgat
cactacggcgacgtggagcagttcgactatccggtgactcacgagcaggcacaggaactc
tggcggcatttcctcgacttctccctggccgccttcggcgattaccaggacgccatggcc
gagggcgagccctttctgttccacgcgcgcatcagtgcggcgctgaatatcgggctgctg
gatgtgcgcctgctgtgtcgtgatgtcgaacgcgcgtaccgcgaaaaacgggttgcgctc
aatgccgcggaagggtttatccgccagttgatcggttggcgcgaatatgtgcgggggatc
tactggctgcgcatgcctgaatacgccgaactcaacggtttgggcaatacccgggcgctg
ccggagttctattggagtggcgccaccgacatgcgctgcctgtcccaggtcatcaggcag
accctggaactgggctatgcccaccatatccagcggctgatggtcaccggcaacttcgcg
ctgctggccgggattgcgcccaaagccatctgcgactggtacctggcggtctacctggat
gcgtttgattgggtcgaactgcccaataccctgggcatggtaatgcacgccgacggcggc
tacctgggctccaagccctactgcgccagcggtcgctacatccagcggatgtccaattac
tgcggcggctgccgctaccgggtggaccaggccaccggcaacgatgcctgcccgttcaac
gccctgtactggcacttcctgatgcgtcacgaaacacaactgggcagcaatccacgcttg
gccatcagctatcgcaacctgcagcgcatggacgagccacgccgggaagccatctggcaa
cgcggcgaggagttgctggcgcgtctggatgcagggcaagccctatga
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