Pseudomonas protegens Cab57: PPC_3017
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Entry
PPC_3017 CDS
T03613
Symbol
fitA
Name
(GenBank) type I secretion system ATPase FitA
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_3017 (fitA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_3017 (fitA)
02044 Secretion system [BR:
ppro02044
]
PPC_3017 (fitA)
Transporters [BR:
ppro02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPC_3017 (fitA)
Secretion system [BR:
ppro02044
]
Type I secretion system
RTX toxin transporter
PPC_3017 (fitA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_18
AAA_29
AAA_22
AAA_30
DUF87
ABC_ATPase
AAA_25
RsgA_GTPase
AAA_5
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BAO62364
LinkDB
All DBs
Position
3336328..3338415
Genome browser
AA seq
695 aa
AA seq
DB search
MACCHLLLQLTQERVPQAAAPQSLDPDPSRDLRQAVRDYARNAGVDLRLERLALTRLTPK
MLPLVWRNQSGEFMLLARLSDTQALVQRPLMPTPDMLDRLQLAEQWSGEVIRLRQSGLRF
DLSWFVPELLRHRRILGEVLLCSLLLQVLALATPLFFQAVMDKVMVHRALSTLDVLVMTL
VVVGLFEVLLKGLREYLAAHTANRIDIGLGVKLLRHLLGLPLLYFKQRQVGAIITRVQEL
DSIREFLTGSLLTLCVDVAFTLVFFAVMAWISWPLTLLVLLTLPLYALLAWFSTGPLEKR
IERQFYSAARNTAFLNESVSSSETIKSLAVEPRMQRRWESQTAQMVEAGFASQTLGSAIS
QTVMLLQKVTAVAVICWGASRVIDLQMSIGQLIAFNMMLSHVSQPVAKLIEVWQQFVRVR
VSVDKLGDMLNLPVEQAEGDLRPAQALRGEVRIEQLVFRYRPELEWVLRGLDLQIAAGQT
LGIVGPSGSGKSTLTRLLQKLYTPDGGRILIDGLPLDQLQPAWLRSQIGVVLQENYLFNR
SVRHNIALRHPTASLESVIAAARLAGAHDFILRLPLGYDTVLAEAGSSLSGGQRQRIAIA
RALMGDPRILIFDEATSALDDESQALIQDNMASIAQGRTVIIIAHRLSAVRHCQRIIALE
QGRISESGSHQQLLANGGCYSRLWALQQALCKEAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttggcctgctgccatctgctgctgcaactgacccaggaacgcgtaccgcaagccgcggcc
ccgcaatccctggaccctgacccttcgcgggacctgcgccaggcggtcagggactacgca
cgcaacgccggtgtcgatctgcgccttgaacgcctggcactgacccggctgaccccgaag
atgctgccccttgtctggcgcaaccagagcggcgaattcatgttgctggcgcggctctcg
gacacccaggcgctggtgcagcgacctttgatgccgaccccggacatgctcgatcgcctg
cagttggccgagcagtggagcggggaggtgattcgcctgcgccagagtggtttgcgcttc
gatctgtcctggttcgtaccggagctgctgcgccatcggcggatactcggcgaagtgctg
ctgtgctcgctgttgctgcaggtgctggccctggcgacgccgttgttcttccaggcggtg
atggacaaggtcatggtgcaccgggcgctgtcgaccctcgacgtgctggtgatgaccctg
gtggtggtgggcctgttcgaggtgctgctcaagggcttgcgcgaatacctggcggcgcac
accgccaatcgcatcgacatcggccttggggtcaagctcttgcgccatctgctgggcctg
ccgctgctgtacttcaagcaacgccaggtgggggcgatcatcacccgggtccaggagctg
gacagcatccgcgagttcctcaccggctcgctgctgaccctgtgtgtcgacgtggccttc
accctggtgttttttgcggtcatggcctggatttcctggccgttgaccctgctggtgctg
ctgaccttgcccctgtatgcgctgctggcctggttcagcaccggcccgctggagaagcgc
atcgagcgccagttctacagcgcggcgcgcaacaccgcctttctcaacgaaagcgtcagc
agcagcgaaaccatcaagagcctggcggtggagccgcgcatgcagcgtcgctgggagtcg
cagacggcgcagatggtcgaggccgggtttgccagccagaccctgggcagtgccatcagc
cagaccgtgatgctgttgcagaaagtcactgcggtggcggtgatctgctggggcgctagc
cgggtcatcgacctgcaaatgagcatcggccagttgattgccttcaacatgatgctgtcc
cacgtcagccagcccgtagccaagctgatcgaggtctggcagcagttcgtccgggtgcgg
gtgtcggtggacaagctgggcgacatgctcaacctgccggtggagcaggccgagggggat
ctgcgcccggcacaggcgttgcgtggcgaagtgcgcatcgaacagttggtgttccgctac
cgtccggaacttgagtgggtgctgcgcggcctggacttgcagatcgccgcggggcagacc
ctgggcatcgtcgggccgtccgggtccggcaagagcacgctgacccgcttgctgcagaaa
ctctacacccccgatggcgggcgcatcctgatcgacggcttgcccctggatcagttgcag
ccggcctggttgcgcagccagattggcgtggtgctccaggaaaactacctgttcaaccgc
agcgtgcgccacaacatcgccctgcgccatcccaccgcctccctggaaagcgtgatcgcc
gcggcgcgcctggccggtgcccatgatttcatcctgcgcctgcccctgggctacgacacg
gtgctggccgaagccggcagctccttgtccggcggccagcggcaacgcatcgccatagcc
cgggcactgatgggcgacccgcgcatcctgattttcgacgaagccaccagcgccctggat
gacgaatcccaggcgctgatccaggacaacatggcgagcatcgcccagggacgcacggtg
atcatcattgcccatcgcctgtctgcggtacggcattgccaacgcatcatcgccctggaa
caggggcgcatcagtgaatcgggcagccaccagcaactcttggccaacggcggttgctac
tcgcgcctgtgggcgctgcaacaggcgctgtgcaaggaggcgtcatga
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