Pseudomonas protegens Cab57: PPC_3055
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Entry
PPC_3055 CDS
T03613
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00061
Fatty acid biosynthesis
ppro00071
Fatty acid degradation
ppro01100
Metabolic pathways
ppro01212
Fatty acid metabolism
ppro02024
Quorum sensing
ppro04146
Peroxisome
Module
ppro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPC_3055
00071 Fatty acid degradation
PPC_3055
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PPC_3055
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_3055
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppro01004
]
PPC_3055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppro04147
]
PPC_3055
Enzymes [BR:
ppro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPC_3055
Lipid biosynthesis proteins [BR:
ppro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PPC_3055
Exosome [BR:
ppro04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPC_3055
Exosomal proteins of breast cancer cells
PPC_3055
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Ortholog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAO62402
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Position
3388471..3390162
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AA seq
563 aa
AA seq
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MDLAAYQQHLHALQQAAWPEGAPRTPQYPLGQQPLTEYLRAWAQSQASAVALDFYGYQLS
FAELDRLSDRCAALLGELGIGPGDRVAVYLPNCPQLHIGFWGILKCGAVYAPVSPLARTL
ELEYQLKDSGARVILCFDQLLDVVQAVSDACELSAILATSLSELCPATPSIPLPDLLRTP
KRLAPGVTDFFPALEACRAATPAHRPALGDMAALNYTGGTTGMPKGCIHSHGDMLYTCAS
FVPVALGLRQDSVLLNFLPEFWIAGENAGLLFPIYAGCRLVLLARWDALGFMAAVAHYRV
SHCGLLVDSAAEVLEHPSVADYDLSSLKATGCISFVKKLTPDYRQRWRAQTGCTLFEFSF
GMTETHTCDTFTAGLQTDDFDLKSAPTFVGLPVPGTEFKVCDFDSGALLPLGSEGELCVR
SPSLLQGYWQRPEASAAALRDGWLHTGDLGQITGQGFIRYLGRRKEMLKVNGMSVFPSEL
EALFGQHPQVLASAVIGRADERRGQQPVAFVVLKPDAPQDPHALAAWCQEVMAAYKVPQI
RLVASLPMTATGKVKKNELEQQL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgcggcctatcagcagcaccttcacgccctgcagcaggccgcctggcccgaa
ggcgcgccgcgtactccgcagtaccccctgggccagcagccccttaccgaatacctgcgg
gcctgggcgcagtcgcaagccagtgccgtggccctggacttctatggctatcagttgagc
tttgccgagctggaccggctgtccgaccggtgcgccgccttgctcggcgagctgggaatc
ggccccggggaccgggtggcggtgtacctgcccaactgcccgcaattgcatatcggcttc
tggggcattctcaagtgcggcgccgtgtacgcgccggtcagccccctggcgcgcaccctg
gagctggagtatcagctcaaggacagcggcgcccgggtgatcctgtgcttcgaccaactg
ctggatgtggtgcaggcggtcagcgacgcctgcgagttgagcgcgatcctggccaccagc
ctcagcgagttgtgcccggccaccccgagcattcccctgccggacctgctgcggacgccc
aagcgcctggccccgggggtgaccgactttttccccgccctggaggcctgtcgcgccgcc
accccggcccaccgtcctgccctgggcgatatggccgcactgaactacaccggtggcacc
accggcatgcccaagggctgcattcatagccacggcgacatgctctacacctgcgccagc
ttcgtgccggtggccttgggcctgaggcaggacagcgtgctgctcaatttccttcccgag
ttctggatcgccggggaaaacgccggcctgctgtttcccatctacgccggctgccgcctg
gtgctgctggcgcgctgggacgccctgggtttcatggcggcggtggcgcactaccgggtc
agccattgcgggctgctggtggacagcgccgccgaagtgctggagcacccaagcgtcgcc
gactacgacctgagctccctgaaggccaccggctgcatctccttcgtcaagaagctcacc
ccggactatcgccagcgctggcgcgcgcaaaccggctgcaccctgttcgagttcagcttc
ggcatgaccgaaacccacacctgcgacacctttaccgccggcctgcagaccgacgacttc
gacctcaaaagcgcgccaaccttcgtcggcctgccggtgccgggcaccgagttcaaggtc
tgcgacttcgacagcggcgccctgctgcccctgggctccgagggcgagttgtgcgtgcgc
agcccttccctgctgcagggttactggcagcgcccggaggcgtccgcggcggccctgcgc
gacggctggctgcacaccggtgacctggggcagatcaccggacaagggtttatccgctac
ctgggccggcgcaaggaaatgctcaaggtcaatggcatgagcgtgtttcccagcgagctg
gaggcgctgttcggccagcacccgcaggtgctggccagcgcagtgatcggccgcgccgat
gaacgtcggggccagcagccggtggccttcgttgtgctcaagcccgatgcgccccaggac
ccgcatgccctggcagcctggtgccaggaggtgatggccgcctacaaggtgccgcagatc
cgcctggtggccagcctgcccatgaccgccaccggcaaggtcaagaagaacgagctggaa
caacagctctga
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