Pseudomonas protegens Cab57: PPC_3346
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Entry
PPC_3346 CDS
T03613
Name
(GenBank) ribonuclease T2 family protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_3346
Enzymes [BR:
ppro01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
PPC_3346
Transfer RNA biogenesis [BR:
ppro03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PPC_3346
Prokaryotic type
PPC_3346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
S_4TM
Motif
Other DBs
NCBI-ProteinID:
BAO62693
LinkDB
All DBs
Position
complement(3732668..3733351)
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AA seq
227 aa
AA seq
DB search
MRFPKEKVTMRKFFTLMAALVLTLGMVGISDARQPKQQRDSVAGTFDYYLLTLSWSPTFC
LMHPENEQCTGKGYGFVLHGLWPQYAKGGWPESCPPLTQLNAQERAKGLTLFPTAKLMNH
EWSKHGTCSGLGAMGYLDAADKALARVQIPEALQPSTSVRYFEASQIAQQFRQSNPGIAE
NGIAILCSGPELSEVRVCLTKDLEFGACGKGVKNQCRAGQIRIPPIR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttccccaaggagaaggtcacgatgagaaagttttttaccctgatggcagccctg
gtgctgaccctggggatggtgggcatcagcgacgcacgtcagcccaagcagcagcgcgac
tcggtggcgggtaccttcgactactacctgctgaccctgtcctggtcgccgaccttctgc
ctgatgcacccggaaaacgagcagtgcaccggcaagggctacggttttgtcctgcacggc
ctgtggccgcaatacgccaagggtggctggcccgagtcctgcccacccctgacccagctc
aatgcccaggaacgggccaagggcctgaccctgtttcccaccgccaagctgatgaaccat
gaatggagcaagcacggcacctgcagcggcctgggggccatggggtacctggatgccgcg
gacaaggccctggccagggtacagattcccgaggcgctgcagccttcgacctcggtgcgc
tatttcgaggccagccagattgcccagcagtttcgccagagcaacccggggatcgccgag
aacggcatcgccattctgtgcagcggccccgagctgtccgaggttcgtgtttgcctgacc
aaggacctggagttcggcgcctgcggcaaaggcgtgaagaaccagtgccgtgccgggcag
atccgcattccgcccatccgctga
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