Pseudomonas protegens Cab57: PPC_3403
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Entry
PPC_3403 CDS
T03613
Name
(GenBank) sugar diacid recognition domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_3403
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
Other families
PPC_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
DUF6074
Motif
Other DBs
NCBI-ProteinID:
BAO62750
LinkDB
All DBs
Position
complement(3798015..3799145)
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AA seq
376 aa
AA seq
DB search
MFELDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRVVE
IDEPTARQLKGVQPGINLPLLHDRRLIGVLGITGDPAQLRTYAELVRMTAEMLVGQRHQQ
AEQQWRRQRCDDLLALLLSDGGDSPRLVDEAQQMGLKPQLARTPYLFELAQEPASGQGVD
SLSSWLLSRYPDSWCVSSSKSSLLWCRPASLSLDNPRLLEKLDGLGWNILRVAVGGQAEG
LAGLRRCYRRVGDLLAYGRDILPDARLLTLNRYRLPVMLWRHRNDDALDELLTPLRKVLA
KDSNGQLLATLRSWCDHDGQSQACADALGIHRNSLRYRMERIAELSGVDPLRLDGMLALY
LGVQLLPRNTAQHNPL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaactggatcatgacctggcgcaggatatcgtcgaccgcacgatggcgatcctg
ccctacaacgtcaacgtcatggacagccagggcctgatccttggcagcggcgagccggag
cgtatcaacacccggcacgaaggcgcgcaactggtgctggccaacggccgggtggtggag
atcgacgaacccaccgcgcgccagctcaagggcgtgcagccgggcatcaacctgccgttg
ctgcatgaccggcggctgatcggggtgctgggcattaccggtgacccggcgcagttgcgc
acctatgccgaactggtgcgcatgaccgccgagatgctggtgggccagcgccaccagcag
gccgagcagcaatggcggcgccagcgctgcgacgacctgctggccctgctgttgagcgac
ggcggcgactcaccgcggctggtggatgaagcccagcagatgggcctcaagccacagctg
gcgcgtacgccctatctgttcgaactggcccaggaaccggcctcggggcagggcgtggat
agcctcagcagttggttgctgagccgctatccggacagctggtgcgtcagctcgtcgaag
agttccctgctctggtgccgcccggcgagcctgagcctggacaacccgcggctgctggaa
aagctcgacggcctgggctggaacatcctgcgggtggcggtgggcgggcaggccgagggc
ctggccggattgcgccgctgctaccgccgggtcggcgacctgctggcctacggccgggat
atcctgccggacgcgcgattgctcaccctcaaccgctaccgcctgccggtgatgctctgg
cgtcaccgcaacgatgacgccctggatgaactgctgacgccgttgcgcaaggtcctggcc
aaggacagcaacggccagttgctggcgaccctgcgcagctggtgcgaccacgacggccag
agccaggcctgcgccgatgccctgggcatccaccgcaacagcctgcgctaccgcatggag
cggatagccgagctcagcggcgtcgaccccttgcgcctggacggcatgctggctctttat
cttggcgtacagctgctgccccgcaacacggctcaacacaatcccctgtag
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