Pseudomonas protegens Cab57: PPC_3557
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Entry
PPC_3557 CDS
T03613
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_3557
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_3557
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BAO62904
LinkDB
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Position
3921184..3922113
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AA seq
309 aa
AA seq
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MLTNLSDVDLRKLRIFCTIVEAGGFTAAQVRLNTSLPRLSTLVRDLEIRLGYSLCRRGKS
GFQLSEQGAQTYAAAQELYADIDRFHRRVVMLNEKYPEFLQIGSVDNLLSLDQAPLPQAL
ASFRLVSPSTRIDLQVMRADELEQAVLEGRLHLAIGCFNHQLSGLHYQALFEEEQNLYCG
RGHPFFARPDEHFTDEEIGAADYVDRGYMLESRRPHKLRFGNSVSAFSMEAIATLIASGT
CIGYLPTHYADIWVARGMLRVIAPQRLRYNAAFHSITRQGQVPTESLAKLMQALQAAKHS
VTLKSSTQV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctcactaatctctcagacgtggatctgcgcaaactgcgcatcttttgcaccatcgtc
gaggctggaggcttcactgccgcgcaggtacgcttaaataccagcctgcctcgcttgagc
acattggtgcgagatctggaaattcgcctcggctactccctctgccgtcgtggcaagagc
ggctttcaactttccgaacaaggcgcccaaacttatgcggcggcgcaggaactgtatgct
gatatcgaccgctttcatcggcgggtagtcatgcttaacgaaaagtatccagagttcttg
cagataggcagcgtcgataacctgctttcactcgaccaggcaccgctgccgcaggccctc
gcttcctttcgcctggtttcgcccagtacccgcatcgacctgcaagtaatgcgtgctgac
gagcttgagcaagccgtgctcgaagggcgtctgcacctcgccatcggttgttttaaccac
cagctctcaggcctgcattaccaagcgttgttcgaggaagaacaaaacctgtattgcggg
cgtggtcatcctttctttgcacgtcccgacgagcattttacggacgaggagatcggtgcc
gcagattacgtagaccgtggctacatgctcgaaagccgccggccgcacaaattgcgcttc
ggcaactcggtaagcgctttctccatggaagccattgccacactgattgcttccggcacc
tgcatcggctacctaccgacccactacgccgatatctgggtagcacgtggcatgttgcgt
gtaattgcaccgcagcggctgaggtataacgcagcatttcatagcatcacccgacaaggg
caagtcccgacagagtcactggccaagctgatgcaagcattgcaggccgcaaagcactcg
gtgacattgaagtcgagcacgcaagtttga
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