Pseudomonas protegens Cab57: PPC_3639
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Entry
PPC_3639 CDS
T03613
Name
(GenBank) sigma factor regulatory protein
KO
K07165
transmembrane sensor
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_3639
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Gene cluster
GFIT
Motif
Pfam:
DUF4880
FecR
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BAO62986
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Position
4005342..4006322
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AA seq
326 aa
AA seq
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MSAFEPMDDQGALDHRVLDQALEWLVLLQSGTSSAEQQAGCLAWRRADPQHELAWQRLAG
LGQDLRDSTRSLPAARTRQLLQARSHPSRRTLLKGVVGLGVVAASSWSVRERLLLPQLFS
DYHTATGERRQLQLAVGTAMQLDTRTTVDLQDRVQGPQLRLNSGRLLLTLGNAAPVRIVT
ADARINLAPLSQLMVSVGLPGHHGTRVQLLSGSASVSLAQGPGQVLGPRQQVDIEQRMSP
ITPVAAAASAWTQGLLIAERMPLGEVIAELDRYRPGLLRCAAEVAGVRVSGSFSLDQPDA
SLDLLARTLPIRIQRVMGYWASVTAA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctttgagcccatggacgatcagggcgcgctggatcaccgggtactggatcag
gccctggaatggctggtgctcctgcagtcgggcaccagcagcgccgagcaacaggccggg
tgcctggcctggcgccgggccgacccgcaacatgaactggcctggcaacgcctggccggg
ctcggccaggacctgcgcgacagcacccgcagcctgcccgccgctcgcacccggcagttg
ctccaggcccgcagccacccttcgcggcgcaccttgctcaagggcgtcgtcggccttgga
gtggtggccgccagcagttggagcgtgcgtgagcggctgctgttgccgcagctgttcagc
gactaccacaccgccaccggcgaacgccgccaactgcaactggcggtcggtacggcgatg
cagttggacacccgcaccacggtggatcttcaggaccgcgtgcaaggaccgcaactacgg
ctcaacagcgggcgcctgctgctgaccctgggcaacgccgcgccggtgcggatcgtcacc
gccgacgccaggatcaacctggcaccgctgtcgcagttgatggtcagcgtcggcttgccg
ggacaccacggcacccgggtgcaactgctgagcggcagcgcctcggtcagcctggcgcag
gggcccggacaggtcctgggcccgcgccagcaggtggacatcgagcaacgcatgagcccc
ataacgccagtggccgccgcggccagcgcctggacccagggcctgctgatcgccgaacgc
atgccgttgggcgaggtgatcgccgaactcgaccgctatcgtccgggcctgctgcgctgc
gccgccgaggtcgccggggtgcgggtatccggttcgttctccctcgaccagccagacgcc
agcctcgacttgctggcccgaaccctgcccattcgcattcagcgggtcatgggctattgg
gcctccgtgacggcagcctga
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