Pseudomonas protegens Cab57: PPC_4024
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Entry
PPC_4024 CDS
T03613
Name
(GenBank) protein of unknown function, DUF490 family
KO
K09800
translocation and assembly module TamB
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_4024
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_4024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BAO63371
LinkDB
All DBs
Position
complement(4458670..4462347)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKRGLKITLLAIVALVILIILAVASVLGTQAGSRWALARVPGLTLENFEGRLGGHWSADH
LLWQQEGNRVELNAVQFTWSPGCLLRMTLCIEQLEADQVSLLFPPSGETETSSEPISLPE
LKLPLAIELGQVRVGSLLFNGSEELKTLQLAAHWTAQGLQIDSLHLKRDDLSLDLSGLLQ
PSGDWPLTAQGNLGLPAPGGGPWSLALKVEGDLLKTLQLNADSRGYLQGQLSGQVQPLVE
NLPAQVRITADGFKASADLPDTLQLDQLELTGKGDLKSGYQLAGKASLPAEQGPVALLLQ
GKVDAKGAQIAALDLSANDKQHLKLSGQLDWSEGFAAEAKLAWLDFPWHRLYPLIDEPAV
RVRSFDAEVAYRDGNYLGNFKGDLDGPAGAFSLSSPFSGDLTKIYLPQFKLAAGQGKAEG
HLNLLFADGIAWDTALDLSAINPAYWVAELPGTLAGPLRSQGEMKNQQLKLNANLDLKGR
LRGQPAVLQAKADGADEQWTLGALDIRLGDNRINGSGSLQQKITGQLEIKMPRLRQLWPE
LRGQLNGRLDLAGTLKAPQGKLDLAGQQLAFAENRLQNLKLDATLDGAQKAQVDLKGSGI
QLGDTQLGTLTLAGQGDIKKQKLQLDLQGPLLKLALGLDGALDQGSWRGRLASGDVQTGG
QDWKLQNPARLERLANGTLNFGAHCWASGDASLCGEDQRLMPDPKLRYHLKRFPLDSLAQ
WLPKDFAWKGMLNADVQLDLPASGPQGQIMLDASGGTLRVKEKDQWLDFPYQALKLNTRL
TPRRIDTQLQFDGGKLGELMLQAQINPLPKSKPLSGDFRLSGLDLSVVRPFVPMVEKLSG
SLNGSGRLSGGLLAPQVNGNVQLSGGEVSGSELPISLEDLQLSAQIAGESVQLNGGWKSG
KAGQGSLNGNIAWGRALLVDLSLKGTQLPVTVEPYAALEVAPDLKISLQEEKLAIAGKVL
IPKGQITVRELPPSTVKVSDDTVIVGQQTDDGKKPMAMAMNIDVEVGQDKLAFSGFGLTA
NLQGHVHIGDNMDTRGELWLNDGRYRAYGQRLTVRRARLLFAGPIDQPYLDIEAVRQTDD
VIAGIRLSGSAEQPATQIFSEPAMSQEQALSYLVLGRPLTSTGEDNNMLAQAALGLGLMG
SSELTGGIAKNLGIQDFQLDTQGSGNNTSVVASGAISERLSLRYGVGVFEPASTIALRYK
LSKKVYLEAASGFASSLDIFYKRDF
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgtggtttgaagataacgctgctggcgattgttgcgctggtgatcctgatcatt
ctggccgtggccagcgtactcggaacccaggctggcagccgctgggccctggcgcgagtg
ccggggctgaccctggaaaatttcgagggccgccttggcgggcactggagcgccgatcat
ctgctctggcaacaggagggcaaccgggtcgagctcaatgccgtgcagttcacctggtcg
cccggctgcctgctgcgcatgaccctgtgcatcgagcagttggaagccgatcaggtcagc
ctgctgttccctccgagcggcgaaaccgaaaccagttcggagcccatcagcctgccggaa
ctgaagctgccgttggccatcgagttggggcaagtgcgtgtgggcagcctgctgttcaat
ggcagtgaagaactcaagaccctgcagctggcggcgcactggactgcccaaggcctgcag
atcgactctttgcacctaaagcgcgatgacctgagtctggacctttccgggctgctgcaa
cccagtggcgactggcccctgaccgcccaaggcaacctcggcttgcccgctcccggcggt
ggcccctggtccctggcgttgaaggttgaaggcgacctgctcaagactctgcagctcaat
gccgacagccgtggctacctgcaagggcaattgagcggccaggtgcagcccctggtggag
aacctgccagcccaggtgcgaatcactgccgatgggttcaaggccagcgccgatctgccg
gacaccctgcaactggatcagctggagctgactggcaagggcgacctgaaaagcggctac
cagctcgccggcaaggccagcctgccggcggagcagggcccggtggccctgttgctgcaa
ggcaaggtcgacgccaagggcgcacagattgccgccctggacctgagcgccaacgacaag
caacacctcaagctcagtgggcaactggactggagcgaaggttttgccgccgaggccaag
ctggcctggctggacttcccctggcaccgtctgtatccgctgattgacgagccggcggtg
cgggtccgcagttttgatgccgaagtggcttaccgtgacggtaactacctgggcaacttc
aagggcgacctggacggcccggcaggcgcgttcagcctgagcagcccgttcagcggcgac
ctgacgaaaatctatctgccgcagttcaagctggcggcgggccagggcaaggccgagggc
cacctgaacctgctgttcgccgacggcattgcctgggataccgccctggatctgtcggcc
atcaaccccgcgtactgggtggcggagctgcccggaaccttggccggccccctgcgcagc
cagggcgaaatgaagaaccagcaactcaagctcaatgccaacctcgacctcaagggacgc
ttgcgcggacagccggcggttctccaggccaaggccgacggagcggacgagcaatggacc
ctgggcgcgctggacatccgcctgggagacaaccggatcaacggctccggcagcctgcaa
cagaagatcaccggccagctggagatcaagatgccgcgcctgcgtcagctctggcccgag
ttgcgtgggcagctcaacggtcggctggacctggccggcactctcaaggcgccacagggc
aagctggacctggctgggcagcaactggcctttgccgaaaaccgcctgcagaacctcaag
ttggacgccactctggatggcgcgcaaaaggcccaggtggacctcaagggcagcgggatt
caactgggcgacacgcagttggggaccctgaccctggccggccagggcgacatcaagaaa
cagaaactgcaactggacctgcaaggaccgctgttgaaactggccctgggcctggatggc
gccctggaccagggcagctggcgcgggcgcctggccagcggcgatgtacagaccggcggc
caggactggaagctgcagaacccggcccggcttgagcggctggccaacggcacgctgaac
ttcggtgcccactgctgggccagcggcgatgccagcctgtgcggtgaagaccagcggctg
atgccggacccgaaactgcgttatcacctcaagcgttttcccctcgacagcctggcgcag
tggttgcccaaggatttcgcctggaagggcatgctcaatgccgatgtgcaattggacttg
ccggccagcgggccccagggccagatcatgctggacgccagcggtggtaccctgcgggtc
aaggaaaaggaccagtggctggatttcccctatcaggcattgaagctcaatacccgactc
accccgaggcgcatcgacacgcagttgcagttcgacggcggcaaactgggtgagctgatg
ctccaggcgcagatcaatcccttgccgaaaagcaaaccgctgtccggtgatttccgcctc
agcggcctggatctgtccgtggtgcggccgttcgtgcccatggtggaaaagctcagcggc
agcctcaatggcagcggtcgtttgtctggcggcctgctggcgcctcaggtcaacggcaac
gtgcagttgtccgggggcgaggtgtccggctccgagttgcccatcagccttgaagacctg
caactgagcgcgcagatcgctggcgagagcgtgcagctcaacggcggctggaaaagcggc
aaggccgggcagggcagcctcaatggcaacatcgcttggggccgggcgctattggtggac
ctgagcctcaagggcacccaactgccggtgacggtggagccctatgcggcgctggaggtg
gcgccggacctgaagatctcgctgcaggaggaaaagctggcgattgctggcaaggtgctg
atccccaagggccagatcaccgtgcgcgaattgccgccctcgacggtcaaggtctccgac
gacacggtgatcgtcggccagcagaccgacgacggcaaaaagcccatggccatggctatg
aacatcgatgtggaggtgggccaggacaagctggccttcagcggtttcggcctgactgcc
aacctgcaggggcacgtgcacattggtgacaacatggatacccgcggtgagctgtggctc
aacgacggccgctatcgggcctacggccagcgcttgaccgtgcgtcgtgcgcggctgctg
tttgccggccccatcgaccagccttacctggacatcgaggccgtgcgccagactgacgac
gtgattgccggcatccgcctgagcggcagcgccgagcaaccggcgacgcagatattttcg
gaaccggccatgagccaggaacaggcgctgtcctatctggttctggggcgcccgctgacg
tccaccggtgaagacaacaacatgctggcccaggcggctctcgggctggggctgatgggc
agctcggaactgaccggaggcattgccaagaacctgggcattcaagacttccaactcgat
acccagggcagcggcaacaacaccagcgtggtggccagcggcgccatttccgaaaggctc
agcctgcgctatggcgtcggggtctttgagcccgccagtaccatcgctctgcgttacaag
ctgagcaagaaggtctatctggaagcggcgagcggtttcgccagctccctggatatcttt
tacaagcgcgatttctga
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