Pseudomonas protegens Cab57: PPC_4093
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Entry
PPC_4093 CDS
T03613
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_4093
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPC_4093
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
BAO63440
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Position
4538889..4539833
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AA seq
314 aa
AA seq
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MQLYFAFYELNVPMLNYRQLHYFWVVAKTGSIVRACDQLNLTPQTISGQISLLEQTYGIE
LFRRVGRQLELTEAGRQALPYAEQMFQLGGELEAMLRARPDEQQIQFRVGVADVVPKSIV
YRLIAPTMELSEPIRLTCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGEC
GISFFATEELARRHGADFPRGLHGAPLLIPGQETVVRSRLLRWFAEQQLQPRIIGEFDDS
ALMQAFGQSGSGIFIAPSVIADEVMQQYGVQLIGQTDAVAESFYAISVERKVKHPGIVAI
TEGARRELFTPLNL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ttgcagttatacttcgctttttacgaactgaatgtgcccatgctcaactaccgccagctg
cattatttctgggttgtggccaagaccggcagcatcgtccgcgcctgcgaccagttgaac
ctgaccccgcaaaccatcagcggccagatcagcctgctggaacagacttacggcatcgaa
ttgtttcgccgggttggccgccagttggagctgaccgaagccggacgccaggccctgccc
tacgccgagcagatgttccagctcgggggcgagctggaagccatgctccgcgcccgcccc
gacgaacagcagatccagttccgggtcggcgtggcggatgtggtgcccaagtccatcgtc
tatcgcctgatcgccccgaccatggagctcagcgagccgatccgcctgacctgccgcgaa
gacaagctcgaacgcctgctggcggacctggccatccagcgcctggacctggtgatttcc
gacagcccgatgccctcgcacctggacatcaagggctacagccagaagctcggggaatgc
ggcatcagtttcttcgccaccgaggagctggcgcggcggcacggcgctgacttcccccgg
ggcctgcacggcgcgccactgctgattcccgggcaggaaaccgtggtccgcagccgcctg
ctgcgctggttcgccgagcaacagttgcagccacgaatcatcggtgaattcgacgacagc
gccctgatgcaggcctttggccaatccggcagtggaatcttcatcgcccccagcgtgatt
gccgacgaggtcatgcaacagtacggagtgcaactgattggccagaccgatgccgtggcc
gagtcgttctacgccatttccgtggagcgcaaggtcaagcaccccggcatcgtggccatt
accgaaggggcgcgacgggaattgttcacgcccctcaatctctga
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