Pseudomonas protegens Cab57: PPC_4309
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Entry
PPC_4309 CDS
T03613
Name
(GenBank) lipopolysaccharide biosynthesis
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_4309
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Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
DUF5891
Motif
Other DBs
NCBI-ProteinID:
BAO63656
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All DBs
Position
4825057..4827051
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AA seq
664 aa
AA seq
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MINIRSFRDLLRLFFIFKREVKITVLVTFVIILLGAFLLPNRFESTALLLVKPGRDTSTL
PIEIADRQAVVIPSAQRDPIIDEERILGGEPIARKVAEKYLDDLSRQPQPSGALATLKNA
VKGAVEGIVDLLRGALQLVGLVEKQSPVERLTERMLKSFSVTHAAGSSVMEVSFTWNDPK
VAQTVVKSWIEQYQQERAQTLGRKSLYAFYETESGATNQRILGYKKQIADYLNQLGAVSI
EERLNDISRNLNNLKGEHLNTTRAVASTRSGLETIQKQLNSMKKEISIGRQMSLNPDRQD
LQQRINAKQIERQEMLRTFREGAPPVRAMDAAIANLQALLKSESGTVQRSENLAPNPVYT
RLQNSFADQQASLSRLQTQAAQQETQLLKLEQERRQALAVEPELARLQRELSAAEKSFAL
YSDSTEKARIDRELDQSQISNIAVIEEATFKPSRVFPKSLSMLLAAIPLSLAVGLLALYF
FYLLDQRIHDGDQIEERFGVKVWTSLQDLDSHLPQRNSAFTASLYRLYGILPLKQVALQG
LVIGLTSARRGEGVSFVTAHLRDLLQERGHVVRVNGAPNAVPGEIVLLEASGFFSNQEAF
VSLREADLIALIVEAETTTVPVLQNALSILTTAFKRVDGIIINRRRFGIPENVLNFLARI
RSPH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatatccgttcctttcgcgatctgctgcggttgttcttcatcttcaagcgcgag
gtcaagatcaccgtcctggtgaccttcgtcatcatcctgctgggcgccttcctgctgccc
aatcgcttcgagtccaccgccctgctgctggtcaagccggggcgcgacaccagcaccctg
ccgatcgagatcgccgatcgccaggctgtggtgattcccagcgcccagcgtgatccgatc
atcgatgaggagcgcatcctcggcggcgagcccatcgcccgcaaagtggcggaaaagtac
ctcgacgacctgtcccgccagccccagccaagtggtgccctggccaccctcaagaacgca
gtgaaaggcgcggtggaaggcatcgtcgacctgctgcgcggggccctgcaactggtgggc
ctggtggagaagcagtccccggtggaacgcctgaccgaacgcatgttgaaaagcttcagc
gtgacccacgccgcaggctcctcggtgatggaagtgagctttacctggaacgaccccaaa
gtggcccagacagtggtcaagagctggatcgagcagtaccagcaggaacgcgcgcaaacc
ctcgggcgcaaaagcctgtacgccttctatgaaaccgaaagtggcgccaccaaccagcgc
atcctcggctacaagaagcagatcgccgactacctgaaccaactgggggcggtgagcatc
gaggagcgcctgaacgatatctcgcgcaacctcaacaacctcaagggcgaacacctcaat
accacccgagcagtggcgtccactcgcagcggcctggagaccatccagaagcagctcaac
agcatgaagaaagaaatcagcatcggccgccagatgagcctcaacccggaccgccaggac
ctgcagcagcggatcaacgccaagcagatcgagcgtcaggaaatgctccgcaccttcagg
gaaggcgcccctccggttcgcgccatggatgcggcaatcgccaacctgcaagccttgctg
aaatcggaaagcggcactgtgcaacgcagcgaaaacctggccccgaacccggtctatacc
cgcctgcagaacagcttcgccgaccagcaggccagcctcagccgcctgcagacccaggcc
gcccagcaggaaacccagttgctcaagctcgaacaggaacggcgccaggcgctggccgtg
gaacctgaactggcacgcctgcaacgggaactgagcgcggcggagaaaagcttcgcgctg
tacagcgacagcaccgagaaagcccgcatcgaccgcgagctggaccagagccagatcagc
aacatcgcggtgatcgaagaagccaccttcaaacccagccgggtctttcccaagagcctg
agcatgctgctcgccgccatccccctgagcctggcggtgggcctgctggcgctgtacttc
ttctatctgctggaccagcgcatccatgacggcgaccagatcgaggagcgcttcggggtc
aaggtctggaccagcctgcaggacctcgacagccacctgccgcaacgcaacagcgccttc
accgccagcctctaccgcctgtacggcatcctgcccctcaagcaagtggcgctgcagggg
ctggtgatcggcctgacctcggcacgccgcggcgaaggcgtgagcttcgtcaccgcgcac
ctgcgcgacctgctccaggagcgcgggcacgtggtgcgggtcaatggcgcccccaacgcg
gtgcccggcgaaatcgtcctgctggaagcctcgggcttcttctccaaccaggaagccttc
gtcagcctgcgcgaggccgacctgatcgccctgatcgtcgaagccgaaaccaccacggtg
cccgtgctgcaaaacgccctgtcgattctcaccaccgccttcaagcgggtcgacggcatc
atcatcaaccgccggcgcttcggcatcccggagaacgtgctgaacttcctggcgcggatc
aggagcccccactga
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