Pseudomonas protegens Cab57: PPC_4342
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Entry
PPC_4342 CDS
T03613
Name
(GenBank) sensor histidine kinase/response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02020
Two-component system
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_4342
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_4342
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppro01001
]
PPC_4342
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppro02022
]
PPC_4342
Enzymes [BR:
ppro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PPC_4342
Protein kinases [BR:
ppro01001
]
Histidine kinases
Other
PPC_4342
Two-component system [BR:
ppro02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
PPC_4342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
CHASE8
Baculo_PEP_C
DUF4164
SMP_2
Motif
Other DBs
NCBI-ProteinID:
BAO63689
LinkDB
All DBs
Position
4865913..4868234
Genome browser
AA seq
773 aa
AA seq
DB search
MDIKFTNRLSYKQARLTVLVGFILGTALSLLQIGIDYASEDASINREIQSLLEISHNPAS
RIAYNIDAELAQELTLGLLRSPAIIRAQLIDNNNTLLANVERPPQQSRYRAISDFLFGAD
RQFEDRLYLSHLPEESLGTLHLDVDTYAFGSRFLRRAEVTLINGFARSLILTGILLALFY
VMLTKPLVRVIRELSSRDPRSPKQAKLDFPHGHENDEVGVLIKVANQQFDIMATEIQQRR
NAENRLTEYLGQLENIVSARTTELKASNARLSQSNEELEIARRTALDMAQARAAFLANMS
HEIRTPLNGLLGMIALSLDSPLNPEQRQQLSIAHDSGKVLVELLNDILDMSKFDAGQLEL
ERIPFDLGVLVEDTANLLSQNAAASVELACLIGPDFPALVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSTLGDGVRIEICDTGIGIAQEAQVRIFQPYTQAGAGITRQYGGTGLGLA
LTYNLCEAMDGRLSISSEVGFGSQFCADLPLPCHTPAAPPPALAGKIIAITEAGSGLAEL
LASLLPSWGLSYQRCDIEDSLAGLDPDLLITDCPECLFGLRPAIRAPILLVTAYGSFLPS
EEANALAPLQQQARPLARNALYQTLRRSLLGETITLNDAQLEMPVQRRRADILLVEDNPV
NQLVAKGMLSKLGCAVTVAAHGAEALNQLELHRFDLVLMDCNMPVMDGYEASRQIRRSGR
WPDLPIIALTANAMSEERERCRAAGMSDYLAKPFRREELIALLDLWVPTTTKL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagttcaccaaccgcctgtcctataaacaggcccggctcaccgtgctggtg
ggtttcattctggggaccgcgctcagtctgctacaaatcggcatcgattatgccagcgaa
gacgcctccatcaatcgtgaaatccaatcgctgctggaaatcagccacaatccggcctcg
cgcatcgcctacaacatcgacgccgagctggcccaggaattgaccctgggcctgctgcgc
tccccggcgatcattcgcgcgcaattgatcgacaacaacaataccctgctggccaacgtc
gaacggccaccgcaacagagccgctatcgggccatcagcgacttcctgttcggcgccgat
cgccagttcgaggatcgcctgtatctgagccacctgccggaggagtccctcggcaccctg
cacctggatgtggatacctacgccttcggcagccgtttcctgcggcgtgccgaagtcacc
ctgatcaacgggttcgcccgcagcctgatactcaccgggattctcctggcgctgttctac
gtgatgctgaccaagcccttggtgcgggtgatccgcgagctcagcagccgcgacccgcgc
agcccgaaacaggccaagctggactttccccatggccacgagaacgacgaagtcggggtg
ctgatcaaggtggccaaccagcagttcgacatcatggccaccgagatccagcagcgacgc
aacgccgaaaaccgcctgaccgaatacctcggacagctggagaacatcgtctcggcccgc
accaccgagctcaaggccagcaatgcccggctcagccagtccaacgaggaactggagatc
gcccggcgcactgccctggacatggcccaggcccgggcggcgtttctggccaacatgagc
cacgagattcgcaccccgctcaatggcctgctggggatgatcgcgctgtccctggacagc
ccgctgaaccccgagcagcgccagcagctgtcgattgcccatgactccggcaaggtgctg
gtggaattgctcaacgatattctcgacatgtccaagttcgacgccgggcaactggagctg
gagcgcattcccttcgatctcggggtactggtggaggacaccgccaacctgctgtcgcaa
aacgccgcggccagcgtggagctggcctgcctgatcggcccggacttccccgccctggta
ctgggggaccctacccgggtgcggcagatcgtcagcaacctgctgtccaacgccctcaag
ttcacccgtttcggccgcgtcgatgtgcgcctgagcaccctgggcgacggggtgcgcatc
gagatctgcgacaccggcatcggcatcgcccaggaagcccaagtgcgcatcttccagccc
tatacccaggccggcgccggcatcactcgccaatacggcggcaccggcctgggcctggcc
ctgacctacaacctctgcgaagccatggacggccgcctgagcatcagttcggaagtcggc
ttcggcagccagttctgcgccgacctgccgctgccctgccacactccggccgccccgccg
ccggcgctggccgggaagatcatcgccatcaccgaggccggcagcggcctcgccgagctg
ctggccagcctgctgcccagttggggcctgagctatcagcgctgtgatatcgaggattcc
ctggccggcctcgaccccgacctgctgatcaccgactgcccggaatgcctgttcggcctg
cgcccggcgatccgcgcgccaatcctgctggtgaccgcctatggcagcttcctgcccagc
gaagaggccaacgccctggcaccgctgcaacagcaggcccggcccctggcgcgcaatgcg
ttgtatcagaccctgcgacgctcgttgctgggggaaaccatcaccctcaacgacgcgcag
ctggaaatgccggtgcaacggcgccgggcggacattctgctggtggaggacaacccggtg
aaccaactggtggccaagggcatgctgagcaagctcggttgcgcggtgaccgtggccgcc
catggcgccgaagccctcaaccagttggagctgcatcgtttcgatctggtgctgatggac
tgcaacatgccggtcatggatggctacgaagccagccgacagatccggcgcagcgggcgc
tggccggatctgccgatcatcgccctgactgccaacgccatgtccgaggagcgtgaacgc
tgccgcgccgccggcatgagcgactacctggccaaaccgttccgtcgcgaggaactgatc
gccctgctcgacctctgggtgccgactacgacaaagctttga
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