Pseudomonas protegens Cab57: PPC_4418
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Entry
PPC_4418 CDS
T03613
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PPC_4418 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppro03011
]
PPC_4418 (rpsA)
Ribosome [BR:
ppro03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PPC_4418 (rpsA)
Bacteria
PPC_4418 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BAO63765
LinkDB
All DBs
Position
complement(4940031..4941725)
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AA seq
564 aa
AA seq
DB search
MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG
ELSINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGVVKEVDAKGAIITLANDIEATL
KASEISRDRIEDARNVLKEGEEVEAKIISVDRKSRVIQLSIKSKDVEDEKEAIQSLRDKP
AASDIAAGPTTLGDLLRAQMEKQN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcggaactctttgaagaaagcctaaaaaccctgaaccttcaggca
ggctccatcatcaccggtgttatcgtcgacatcgactaccaagcgcgttgggtaaccgtt
cacgctggtctgaagtctgaagcgctgatcccgcttgagcagttctacaacgatgctggc
gaactgtccatcaatgttggtgatgaagttcacgttgctctggattcggttgaagacggc
tttggtgaaaccaagctctcccgtgaaaaagccaagcgcgctgaatgctggatcgttctg
gaagcagccttcgcagccgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgccaggttctctggttgacgtc
cgtccagtgcgcgacaccacgcacctggaaggcaaagagctcgagtttaaagtcatcaaa
ctcgaccagaagcgcaacaacgttgtcgtttcccgccgcagcgtcctcgaagccgagaac
tccgctgagcgtgaagctctgctggaatccctgcaggaaggtcagcaagtcaaaggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgctg
cacatcaccgacatggcttggaagcgtatcaagcatccttccgaaatcgtcaacgttggc
gacgagatcgatgtcaaggttctgaagtacgatcgcgagcgcaatcgtgtttccctgggc
ctgaagcaactgggcgaagatccatgggttgctatcaaggctcgttacccagaaagcacc
cgcgttaccgctcgtgtaaccaacctgaccgactacggctgcttcgctgagctggaagaa
ggcgtggaaggcctggtacacgtttcggaaatggactggaccaacaagaacatccaccct
tcgaaagtcgtacaagtcggcgacgaagtggaagttatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaagcagtgcaagtccaacccatgggaagacttctct
ggccagttcaacaagggcgataagatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggtctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgtacgccgtttcaagaagggcgacgagctggacaccgtt
atcctgtcggttgacccagagcgcgagcgtatctctctgggtatcaagcaactggaaagc
gatccgttctccgagtacgtccaagagaacgacaaaggcgcaatcgttaagggtgttgta
aaagaagttgacgccaaaggcgccatcatcaccctggctaacgatatcgaagctactctg
aaagcctccgaaatcagccgtgaccgcatcgaagatgcgcgtaacgttctgaaagaaggc
gaagaagttgaagccaagatcatcagcgttgaccgtaagagccgtgtaatccagctctcg
atcaagtcgaaagacgttgaagacgagaaagaagctatccagagcctgcgcgacaagcca
gctgcttcggatatcgctgctggtcctaccactctgggtgacctgctgcgtgcacaaatg
gaaaagcagaactaa
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