Pseudomonas protegens Cab57: PPC_4701
Help
Entry
PPC_4701 CDS
T03613
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00061
Fatty acid biosynthesis
ppro00071
Fatty acid degradation
ppro01100
Metabolic pathways
ppro01212
Fatty acid metabolism
ppro02024
Quorum sensing
ppro04146
Peroxisome
Module
ppro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPC_4701
00071 Fatty acid degradation
PPC_4701
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PPC_4701
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_4701
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppro01004
]
PPC_4701
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppro04147
]
PPC_4701
Enzymes [BR:
ppro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPC_4701
Lipid biosynthesis proteins [BR:
ppro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PPC_4701
Exosome [BR:
ppro04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPC_4701
Exosomal proteins of breast cancer cells
PPC_4701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO64048
LinkDB
All DBs
Position
complement(5239011..5240699)
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPNEIDLGAFKSVIEVFERSCKKFPDRPAFSNMGVTLTYAELERYSA
AFAGYLQSHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFKD
CGARALVYLNIFGQKVQEVLGDTDIQFLIEARMGDMMPSAKGWLINTVVDKVKKMVPAYH
LPQAISFKSALRLGRGQSIKPLQVGHDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQHGPDGHTQWREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKKWRFSALLGLNTLFVALMDHPDFKNLDFSNLKLTNSGGTALVKATAERWQKLTGCR
ITEGYGLTETSPVACTNPYGERSRLGTVGLPVPGTTLKIIDDQGVELPLGERGELCIKGP
QIMKGYWNKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGIPDERSGEAVKLFVVPREAGVSLEELKAYCKENFTGYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgataagcgccccgctggcgtccccaacgagatcgacctg
ggggccttcaagtcggtgatcgaggtgtttgagcgttcctgcaagaaattccctgatcgc
ccggccttcagcaacatgggcgtgaccctcacctacgccgagctggaacgctacagcgcg
gccttcgccggttatctgcaaagccataccgatctggttccgggagaccgtattgcggtg
cagatgcccaacgttttgcagtacccgatcgcggtattcggagccttgcgcgcagggctg
gtggtggtcaataccaacccgctgtacaccgcgcgggagatgcgccaccagttcaaggat
tgcggggcccgggccctggtctacctgaacatcttcggccagaaggtccaggaagtgctg
ggggataccgatatccagttcctgatcgaggcccggatgggcgacatgatgcccagcgcc
aagggctggctgatcaataccgtggtggacaaggtcaagaagatggtgccggcctaccac
ctgccccaggccatttccttcaagagtgccctgcgcctggggcgtggccagagcatcaag
ccgctgcaggtgggccacgacgatgttgcggtgctgcagtacaccgggggcaccaccggc
ctggccaagggcgcgatgctgacccacggcaacctggtggccaacatgcagcaggcgcgg
gcctgcctcggccagcatgggcccgacggccacacccagtggcgcgagggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaactgcatgtgcatg
atggtgaccggcaaccacaacgtgctgatcaccaacccgcgggacatcggcggcttcatc
aaggagctgaagaagtggcgtttttctgcgctactggggctcaacacgctgtttgtggca
ctgatggatcacccggatttcaagaacctggatttttccaatctgaagctcaccaactct
ggcggcacggccctggtcaaggctaccgccgagcgctggcagaagctgaccggctgccgg
atcaccgaaggctacgggctgaccgaaacctcaccggtggcctgtaccaacccctatggc
gagcgttcgcggctgggcaccgtcggcctgccggtaccgggcaccaccttgaagatcatc
gatgaccagggcgtcgagctgccgctgggcgagcggggcgagctgtgcatcaaggggccg
cagatcatgaagggctactggaacaaacccgaggccactgccgaagtgctggatgccgag
ggctggttcaagtccggtgatatcgcggtgatcgatccggacggtttcgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctcgggtttcaacgtgtatccgaacgagatcgag
gatgtggtcatggctcacccgaaagtcgccaactgtgcagtcatcggcataccggacgag
cgttccggcgaggcggtgaagctgtttgtggtgccgcgtgaggcgggggtcagccttgaa
gagctcaaggcctactgcaaagagaatttcaccggctacaaggtgcccaagcacattgtg
ctgcgtgactctttgccgatgaccccggtgggcaagatcctgcgccgcgagttgcgcgac
atcgcttga
DBGET
integrated database retrieval system
