Pseudomonas protegens Cab57: PPC_4734
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Entry
PPC_4734 CDS
T03613
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPC_4734 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_4734 (alkA)
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PPC_4734 (alkA)
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPC_4734 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAO64081
LinkDB
All DBs
Position
complement(5276528..5277397)
Genome browser
AA seq
289 aa
AA seq
DB search
MIHHLPYQGAYDWPAMLGFLRARAIEGLEVVQGDTYARTFALVGGQGILSVCPGPAGHLQ
VQLQGAEQALLPQVLARLRRQFDLDADLPLINRHLARDPLLAPLLAARPGLRVPGAWDGF
ELAIRAVLGQQITVQGAIRLAGKLVAVHGRLLASPDPQWPGLTHLFPTPQVLSTANLADL
GMPRSRARTLSAVAQALLDDPLLFEPRASLQQGVERLLQLPGIGDWTAQYIALRQLCESD
AFPAADVGLFNAVARLQGLRPNARQLLARAEAWRPWRGYAAQHLWAAMG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgattcatcacttgccctaccagggcgcctacgactggccggcgatgctgggctttctc
agggcccgcgccatcgaaggcctggaggtggtgcagggcgatacttatgcccgcaccttc
gcgctggtgggcgggcaaggcatcttgagtgtctgcccggggcctgcaggccatttgcag
gtgcagttgcagggggccgagcaggccctgctgccccaggtgctggcgcgcttgcgccgg
caattcgatctggacgcggacctgcccctgatcaaccgccatctggcccgtgatccgctg
ctcgcaccgttgctggcggcacgcccgggcctgcgagtacccggggcctgggacggtttc
gagctggccattcgcgccgtgctgggccagcagatcaccgtgcagggcgcgatccgcctg
gcgggcaagctggtggcggtgcatggccggttgctggccagtcccgacccgcagtggccc
ggtttgacccacctgtttcccactccccaggtgctgtccactgccaacctggccgacctg
ggaatgccccgcagccgggcacgcacgctgtctgccgtggcccaggccttgctcgacgat
ccactcctgttcgaacccagggccagcctgcaacagggggtggagcgcctgttgcaattg
ccgggaatcggcgattggaccgcgcaatatatcgccctgcgccagttgtgcgagagcgat
gcctttccggcggcggacgtaggcctgttcaacgctgtggcacgtctgcaggggctgcgg
cccaatgcccgccaactgctggcccgggccgaggcctggcggccgtggcgcggttatgcg
gcgcagcatttgtgggcggccatgggctga
DBGET
integrated database retrieval system
