Pseudomonas protegens Cab57: PPC_4771
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Entry
PPC_4771 CDS
T03613
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPC_4771 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_4771 (ruvB)
Enzymes [BR:
ppro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPC_4771 (ruvB)
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PPC_4771 (ruvB)
RecFOR pathway proteins
PPC_4771 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
TIP49
AAA_16
AAA_17
AAA_14
nSTAND3
AAA_18
AAA_2
RNA_helicase
Rad17
AAA_28
ABC_tran
NTPase_1
NB-ARC
AAA_24
TsaE
SAM_Ribosomal_mS41
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAO64118
LinkDB
All DBs
Position
complement(5318932..5319990)
Genome browser
AA seq
352 aa
AA seq
DB search
MIEADRLIAATGPREREEIQDRAIRPVSLADYIGQPSVREQMELFIQAARGRNESLDHTL
IFGPPGLGKTTLANIIAEEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYSTADLATIVSRSAGILGLPLDPEGAFEVARRARGTPRIANRLLRRVRDFAEVRAK
GHITKPIADLALNLLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGDMPVVDEFLDAVDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagccgaccgtctgatcgccgccacgggcccccgtgagcgcgaggaaatccag
gaccgggcgattcgtccggtcagcctggccgactacatcggccagcctagcgtgcgcgag
cagatggaactgttcatccaggccgcccgtgggcgcaacgaatccctggaccacaccctg
atcttcggtcccccgggcctgggcaagaccaccctggccaacatcatcgccgaggaaatg
ggggtgtcgatcaagagtacgtccggcccggtgctggagcgccctggtgatctggcggcc
ttgctgaccaatcttgagcctcacgacgtactgttcatcgacgagattcaccggctttcg
ccgattgtcgaagaagtgctgtacccggccatggaagatttccagctcgacatcatgatc
ggcgaaggccctgcggcgcgctcgatcaagctcgatctgccgccgttcaccctggtgggg
gcaaccacgcgtgcggggatgctgaccaacccgctgcgggaccgcttcggcatcgtccag
cgcctggagttctacagcactgcggacctggcaaccattgtcagccgttccgccggcatt
cttggtttgcccctggatccggaaggcgccttcgaggtcgcgcgccgtgcccggggcact
ccgcggatcgccaaccgtttgctgcgtcgggtgcgggatttcgccgaggtgcgggccaag
gggcatatcaccaaaccgatcgccgacctggcgctgaacctgctggacgtcgatgagcgt
ggcttcgaccaccaggaccgacgtctactgctgaccatgatcgagaagttcgacggcgga
ccggtgggggtcgacagcctggccgcggccatcagtgaagagcgccataccatcgaggat
gtactggagccgtacctgatccagcagggctatatcatgcgcaccccccgtggtcgtgtg
gtgacccggcatgcctacctgcacttcggtcttaacattccgtcacgaatgggagacatg
cccgtggtagacgaattcctcgatgccgtggacgattaa
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