Pseudomonas protegens Cab57: PPC_4781
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Entry
PPC_4781 CDS
T03613
Symbol
oprD
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro01501
beta-Lactam resistance
ppro02020
Two-component system
Module
ppro_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_4781 (oprD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPC_4781 (oprD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_4781 (oprD)
01504 Antimicrobial resistance genes [BR:
ppro01504
]
PPC_4781 (oprD)
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_4781 (oprD)
Antimicrobial resistance genes [BR:
ppro01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PPC_4781 (oprD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
BAO64128
LinkDB
All DBs
Position
5327740..5329080
Genome browser
AA seq
446 aa
AA seq
DB search
MRVMKWSMIALAVSAGTSQFAIASSQDDAKGFIEDSTLTAKTRAMYMNRDYKDGVGNVRR
GNGTYTTGTDDKTSGYRQDTGISELLTYQSGFTQGTVGFGVDAMAMGSVKLDGGSGRAGN
GLFATNGSGEPENTQSKLGGAAKFRISDTVLKYGNQFVSSPVFTTDDGRLLPEVATGTLI
TSNEIKGLELIGGRFTALSAQTGMGRDSINGRSRVTGKQNPGLSSANIVGATYSGLENFI
FAVHASDVEDYWKKQYFNVNYTLPLSEKQSLNFDFNGYRSKDDGKKLAGDLDNRVWSLAA
AYSIEAHKFTVAYQQSSGKTGYNYGVDGGGTVYVANSVQISDFVGEDERSWQARYDLNMA
SFGVPGLSFMTRYIRGSNVTVADSSDGKEHEWDVEAKYVLQEGPAKDLSFRLRNAIYRGT
NSDYRATNYDNLNDLRLIVEYPLSIL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggctgtatcagcaggcacctcgcagttt
gcaattgcatcctcccaggacgatgcaaaaggctttatcgaagacagcaccctgaccgcg
aaaactcgcgcaatgtacatgaaccgtgactataaggacggcgttggtaacgtgcgtcgt
ggtaacggtacttacaccacaggcactgacgataaaaccagcggctaccgtcaagacacc
ggtatcagcgaactgctcacctatcagtccggcttcactcaaggcaccgtcggcttcggc
gtcgatgccatggccatgggcagcgtgaaactcgacggcggttcgggtcgtgcgggtaac
ggcctgttcgccaccaatggttccggcgagcctgaaaacacccagtcgaaactgggcggc
gctgcgaagttccgcatctccgatactgtactgaaatacggcaaccagttcgtatccagc
ccagtatttactacagacgacggccgtctgttgcctgaagttgccaccggtaccctgatc
accagcaacgaaatcaagggcctggaactgatcggtggtcgcttcaccgcattgagcgcc
cagaccggcatgggccgtgacagcatcaacggtcgcagccgcgttactggcaaacagaac
ccgggcctgagctctgcaaacatcgtaggtgctacctactcgggtcttgagaacttcatt
ttcgccgtgcacgcttccgatgttgaagactactggaagaagcagtacttcaacgtcaac
tacaccctgccgctgagcgaaaaacaatctctgaacttcgacttcaacggctatcgcagc
aaggatgatggtaagaagctggctggcgacctggacaaccgcgtctggagcctggcagct
gcctatagcatcgaagcccacaaattcaccgtggcttaccagcagtccagcggcaagacc
ggctacaactacggcgttgatggtggtggcaccgtttacgtagccaactctgtgcagatc
tccgacttcgtgggcgaagacgaaagatcctggcaggctcgctacgacctgaacatggcc
tccttcggcgtgccaggcctgagcttcatgactcgctacattcgcggtagcaacgttacc
gttgctgactccagtgacggcaaagagcatgaatgggacgtagaagccaagtacgtgctt
caggaaggcccggccaaagacctgtccttccgtctgcgtaacgcgatctatcgtggtacc
aatagcgattaccgcgcgaccaactacgacaacctgaacgacctgcgtctgatcgtagag
tacccactgagcatcttgtaa
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