Pseudomonas protegens Cab57: PPC_4878
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Entry
PPC_4878 CDS
T03613
Name
(GenBank) glycerol-3-phosphate regulon repressor
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_4878
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
PPC_4878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
MarR
HTH_Crp_2
MarR_2
GntR
HTH_PafC
Put_DNA-bind_N
Sigma70_r4
HTH_Mga
Sigma70_r4_2
TFIIE_alpha
HTH_28
HTH_24
Rrf2
DDRGK
Motif
Other DBs
NCBI-ProteinID:
BAO64225
LinkDB
All DBs
Position
5430658..5431413
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AA seq
251 aa
AA seq
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MNLPPRQQQILDLVRERGYVSIEELAQLFVVTPQTIRRDINQLAEANLLRRYHGGAAYDS
SVENTAYAMRADQMRDEKQRIGEAVAAQIPDHASLFINIGTTTESIARALLHHSHLKIIT
NNLHVASMLSAKDDFDVLLTGGNVRRDGGVVGQASVDFINQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARQVILAADSSKFGRNAMIRLGPISLIDCLVTDQQPVPALTQL
LNQHKIRLEVV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcctccccgtcagcagcaaattctcgatctggttcgcgaacgcggctacgtc
agcatcgaggaattagcccagctgttcgtcgtaaccccgcaaaccatccgccgcgatatc
aaccagctggcggaagccaatctgctgcgccgctaccatggtggcgcagcctatgactcc
agcgtagaaaacaccgcctacgccatgcgcgccgaccagatgcgcgacgaaaagcagcgc
atcggcgaagccgttgccgcgcagatccccgatcacgcctcgctgttcatcaatatcggc
accaccaccgaatccatcgcccgggccctgctccatcacagccacctgaagatcatcacc
aacaacctgcacgtggcctcgatgctcagcgccaaggatgatttcgacgtactgctcacc
ggcggcaatgtgcgccgtgacggcggcgtggtaggccaggccagtgtcgacttcatcaac
cagttcaaggtcgacttcgccctggtgggcatcagtggcatcgacgaggacggcagcctg
ctggacttcgactaccaggaagtgcgggtatcccaggcgatcatcgccaatgcccggcag
gtgatcctggctgccgactccagcaagttcgggcgcaacgccatgatccgcctggggccc
atcagcctgatcgattgcctggtcaccgaccagcaaccggtaccggccctgacccaactg
ctcaaccagcacaagatccgcctcgaagtggtctga
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