Pseudomonas protegens Cab57: PPC_4946
Help
Entry
PPC_4946 CDS
T03613
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppro03000
]
PPC_4946 (treR)
Transcription factors [BR:
ppro03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PPC_4946 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
HTH_11
DUF7782
Rrf2
DIP2311-like_C
FmdA_AmdA
Motif
Other DBs
NCBI-ProteinID:
BAO64293
LinkDB
All DBs
Position
5506170..5506874
Genome browser
AA seq
234 aa
AA seq
DB search
MSKYNQIYSDLLASITTERLERGARLPSESELMDSYQASRGTVRKAIELLQERGFAQKIH
GKGTFVLSPNPIEFQLGGIVSFQETYPRLGDDVSTEVVEFSQFPLQGALRNHLQAEEGSL
VTRIKRVRRIDGKRVILDINHFVAELIPGLDRQIAEHSIYAYIEQTLQLNISYAQRTIEA
SPRSKDDQQLLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDVARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacaaccagatctacagcgatctgcttgccagcatcaccaccgaacgtctg
gagcgtggcgcccgcctgccttcggaaagcgaactgatggacagctaccaggccagccgc
ggcaccgtgcgcaaggccatcgaactgctccaggagcgcggctttgcgcagaagatccac
ggcaagggcaccttcgtcctctcgcccaaccccatcgagttccagctgggcggcatcgtc
agcttccaggaaacctacccacggctgggggatgacgtcagcaccgaagtggtggagttc
agccagttccccctgcaaggcgcactgagaaatcacctgcaggcagaggaaggcagcctg
gtcacccggatcaagcgggtgcggcgcatcgatggcaagcgggtgattctcgacatcaac
cacttcgttgccgaactgatcccggggctggaccggcagatcgccgagcactcgatctac
gcctacatcgaacagaccctgcaactgaacatcagctatgcccagcgcaccatcgaggcc
agcccgcggagcaaggacgaccagcaactgctcgacctggacggccagagccatgtgatc
gtggtgagcaaccagacctttctccaggatggccggcagttcgaatacaccgaatcacgg
cacaccctggacaagttctacttctcggacgtggcccggcgctaa
DBGET
integrated database retrieval system
