Pseudomonas protegens Cab57: PPC_5027
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Entry
PPC_5027 CDS
T03613
Symbol
glyA_1
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00260
Glycine, serine and threonine metabolism
ppro00460
Cyanoamino acid metabolism
ppro00630
Glyoxylate and dicarboxylate metabolism
ppro00670
One carbon pool by folate
ppro00680
Methane metabolism
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
ppro01230
Biosynthesis of amino acids
ppro01240
Biosynthesis of cofactors
ppro04981
Folate transport and metabolism
Module
ppro_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPC_5027 (glyA_1)
09102 Energy metabolism
00680 Methane metabolism
PPC_5027 (glyA_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPC_5027 (glyA_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PPC_5027 (glyA_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PPC_5027 (glyA_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PPC_5027 (glyA_1)
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PPC_5027 (glyA_1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAO64374
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Position
complement(5586164..5587519)
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AA seq
451 aa
AA seq
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MAADTEPLRNQADLLRCGLADLRTEDAELARILDAEVSRQQRTLSLVSSSCAATPRSLAA
SASALVNVTAQGVAGKRHHAGCENVDLVESLAIRRARELFAAQYAAVQSHSASNANYQVL
SALLEPGDTLLGMALDHGGDLTHGSSLAFTGAHYKAIRYGTTAQGTIDYQEVRQLAMAHR
PRIIICGATAYSRVVDFQRFRDIADEAGAIVLADISHIAGLVATGRHPSPIDVAHVTTTC
THKQLAGPRGGLILSGRDADTKVPGLRSSFRRVLDQAVFPGMQGAPAVNMIAAKAAALGY
AMSAQFDAYMGRIRATADEMACAFMARDYEVMGGGTENHTILLRLPKGISGSLAESALEK
CGIIVSKKRAPGETRSSFAANGLCIGTGSIAQRYVDPQGCRQIVDLVCRILDQLQPRGEQ
PYVLEPAQQERFRLETEALCAMYPILEYGDR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgataccgaaccactgaggaaccaggccgacttgctgcgatgtggcttggcg
gacttgcgaacagaagacgccgagctggccaggatcctggacgctgaagtaagccggcaa
caacgcacgctttccctggtttcatcctcctgtgcagccacccccagaagccttgccgct
tcggcctcggctctggtcaacgtgacggcgcagggggttgcgggcaaacgccatcacgcc
gggtgcgaaaacgtcgatctggtggaatccctggcgatccgcagggcacgggagctgttt
gccgcgcaatacgccgcggtgcaatcgcactcggcctcgaacgccaactaccaggtgttg
tccgcgctgcttgagccgggggacaccctgctcgggatggccctggatcatggcggcgac
ctgacccacggcagctccctcgcttttaccggtgctcactacaaggcgatccgctacggc
accacggcccagggcaccatcgactaccaggaggtacgtcagctggcgatggcccaccgc
ccgcgcatcatcatctgtggggcaacggcttattcgcgggtcgtggacttccagcgtttt
cgcgacattgccgatgaagccggggccatcgtccttgccgacatctcccatatcgccggc
ctggttgccacggggcgtcacccgagcccgatcgatgtggcgcacgtcaccaccacttgc
acccacaaacagctcgccgggccacgcggcggcctgattctttccgggcgggacgcggac
accaaggtgcccggcctgaggtcgagctttcgtcgggtgctcgaccaggcagttttcccc
gggatgcagggggcgcctgcagtcaacatgatcgccgccaaggcagccgcactgggctat
gccatgtctgcacagttcgatgcctacatggggcggattcgcgccacggcggatgaaatg
gcctgcgcgttcatggcgcgggactacgaggtaatgggcggcgggacggaaaaccacacg
atcctgttgcgcttgcctaagggtatcagcggctccctggccgaatcggcattggaaaag
tgcggaatcatcgtcagcaaaaaacgcgcaccgggggagactcgatcgtcatttgccgcc
aatggcttgtgtatcggcacgggctccatcgcacagcgctatgtggacccccagggctgt
cggcagatcgtcgacctggtgtgccggatactggatcagctgcagccgcggggcgagcag
ccatacgttctggagcccgcgcagcaggagcgcttccggctggagaccgaggcgttgtgt
gcgatgtaccccatccttgagtacggggatcgctga
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