Pseudomonas protegens Cab57: PPC_5047
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Entry
PPC_5047 CDS
T03613
Name
(GenBank) RND transporter, heavy metal efflux (HME) family permease
KO
K21133
multidrug efflux pump
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5047
Transporters [BR:
ppro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPC_5047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BAO64394
LinkDB
All DBs
Position
5606749..5609844
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AA seq
1031 aa
AA seq
DB search
MKGHGSVSAWCIDHPVATVLLTFALVLLGAIAFPRLPVAPLPEAEFPTIQVSAALPGASP
DTMASSVATPLEVQFSAIPGMTQMTSSSALGSSLLTLQFTLNKSIDTAAQEVQAAINTAA
GKLPKDMPTLPTWKKVNPADSPVLILSISSTQMPGTELSDYAETLLARQISQIDGVGQIN
ITGQQRPAIRVQASADKLAAIGLTLADIRLAIQQTSLNLAKGALYGESSISTLSTNDQLF
HPEEYGQLIVSYKDGAPVHLQDVARVVNGSEDAYVQAWSGDQPGVNLVISRQPGANIVET
VDRIQAALPGLEAMLPASVQVKLLVDRTQTIRASLHEVEITLLIAVLLVVAVMVLFLRQW
SATLIVSAVLGVSLTASFALMYVLGFSLNNLTLVAIVVAVGFVVDDAIVVVENIHRHLEA
GDGMREAAIKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTIMISVV
VSLTLAPTLAALFMRAPVHPAHAKPGFGERLLAVYERGLRKALAHQKLMLGIFGLTLSMA
IAGYILIPKGFFPVQDTGFVLGTTEAAADISYPDMVKKHQALAEIVAADPAVQAFSHSVG
VSGSNQTIANGRFWISLKNRGDRDVSASAFIDRIRPQLMKVPGIVLYLRAGQDINLSSGP
SRAQYQYVLKSNDGPTLSTWTQRLTEKLRSNPAFRDISNDLQLGGSITHIQIDRTAAARF
GLTASDVDEALYDAFGQRQINEFQTEINQYNVILELDTQQRGKAESLNYFYLRSPLTGEM
VPLSALARFDAPTIGPLSIAHDGMFPAANLSFNLAPGVALGDAVILLNQAKSEIGMPTAI
SGNFQGAAQAFQSSLASQPYLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALLM
LWLCGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRHGGLPPEEAIYQACITRFRPI
IMTTLAALLGALPLMLGYGAGAELRQPLGIAVVGGLLVSQALTLFTTPVIYLWLERLFHR
PQPDLLPATTT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccatggctcggtgtccgcctggtgcatcgaccatccggtcgccaccgtccta
ctgaccttcgccctggtactgttgggcgccattgccttcccgcgcctgccggtggctccg
ctgccagaggccgagttcccgaccatccaggtgtccgccgccctgcccggtgccagcccg
gacaccatggcctcttccgtggccacgcccctggaggtgcaattcagcgccattcccggc
atgacccagatgacctccagcagcgccctgggctcgtccctgctgaccctgcagttcacc
ttgaacaagagcatcgacaccgccgcccaggaagtgcaggcggcgatcaacaccgccgct
ggcaagttgcccaaggacatgcccaccctgcccacctggaagaaggtcaacccggcggac
agcccggtgctgatcctcagcatcagttcgacgcagatgcccggcaccgagctgagtgac
tacgcggaaaccctgctggcccgacagatcagccagatcgacggggtcggccagatcaac
atcaccggccagcagcgcccggcgatccgggtccaggcttcggcggacaaactggcggcc
atcggcctgaccctggccgacatccgcctggcgatccagcagaccagcctcaacctggcc
aagggtgcactgtacggcgagtcgagcatctccaccctgtccaccaacgaccagttgttc
caccccgaggaatacggccagttgatcgtttcctacaaagacggtgcccccgtgcacttg
caggatgtggcgcgggtagtcaacggctccgaagatgcctacgtccaggcctggtccggt
gaccaaccgggggtcaacctggtgatctcgcgccagcccggggccaatatcgtcgagacc
gtagaccgcatccaggctgccctgccaggcctggaggccatgctcccggcctcggtgcag
gtcaagttgctggtggaccggacccagaccattcgcgcctcattgcacgaagtggagatc
accctgctgatcgccgtgctgctggtggtggcggtgatggtgctgttcctgcgccagtgg
tcggcaacgctgatcgtctcggcggtgctgggcgtgtccctgaccgccagtttcgccttg
atgtacgtgctgggcttcagcctgaacaacctgaccctggtggccattgtcgtggccgtg
ggctttgtggtggatgacgccatcgtcgtagtggagaacatccaccgccacctggaagcc
ggcgacggcatgcgcgaggcggcaatcaagggcgccggcgagatcggcttcaccgtggtc
tccatcagcttctccctggtggcggcgttcattcccctgctgttcatgggcggcgtggtg
ggccggctgttcaaggagttcgccctgaccgccacctccaccatcatgatttcggtggtg
gtctcgctgaccctggcccccaccctggcggccctgttcatgcgcgcgccggtgcacccg
gcccatgccaagccgggcttcggcgagcgcctgctggcggtctacgagcgcggcctgcgc
aaggccctggcccatcagaaactgatgctggggatcttcggcctgaccctgagcatggcc
attgccggctatatcctgatccccaagggcttcttccccgtgcaggacaccggcttcgtg
ctcggtactaccgaggctgcggcggacatttcctacccggacatggtgaaaaagcaccag
gcgctggccgagatcgtcgccgccgacccggcagtgcaggccttctcccactccgtgggg
gtctcgggcagcaaccagaccatcgccaacggccgcttctggatttccctcaagaaccgt
ggcgaccgggacgtgtctgccagtgccttcatcgaccgcatccgcccgcaactgatgaag
gtgcccggcattgtcctgtacctgcgggccggccaggacatcaacctcagctctggtccc
agccgcgcccagtaccagtacgtactgaaaagcaacgacggcccgaccctgagcacctgg
acccagcgcctgacggaaaagctgcgcagcaacccggccttccgtgacatctccaacgat
ctgcaactgggcggcagcatcacccacatccaaatcgatcgcacggctgccgcgcgtttc
ggccttaccgccagcgatgtcgacgaagcactgtacgacgccttcggccagcgccagatc
aacgagttccagaccgagatcaaccagtacaacgtgatccttgaactcgacacccagcaa
cggggcaaggccgagagcctcaactacttctacctgcgctcgccgctgaccggagaaatg
gtcccgctctctgccctggcgcgcttcgatgcgcccaccatcggcccgctgtcgattgcc
cacgacggcatgttcccggcggccaacctgtccttcaacctggcccccggcgtggccctg
ggcgatgcggtcatcctgctaaaccaggccaagagcgagatcggcatgccaacggccatc
agcggcaatttccagggcgcggcccaagccttccagagctcgctggccagccagccgtac
ctgatcctggcggcactggtggcggtgtacatcattctcggggtgctgtacgaaagcttc
gtgcatcccttgaccatcatttccaccctgccctcggccgggctgggcgccttgctgatg
ctctggctgtgcggccaggacttttccatcatggcgctgatcggcctggtgctgctgatc
ggcatcgtcaagaagaacggcatcctgatgatcgactttgccctggaagcccagcgccat
ggcggcctgcctcccgaggaggcgatctaccaggcctgcatcacccgcttccggccgatc
atcatgaccaccctggccgccctgctcggtgccctgccactgatgctcggctacggcgcc
ggtgccgaactgcgccagcccctggggattgccgtggtgggcggcctgctggtcagccag
gccctgacgctgttcaccacgccggtcatatacttgtggcttgagcggctgttccaccgg
ccccagccggatctgttgccggccaccactacctga
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