Pseudomonas protegens Cab57: PPC_5130
Help
Entry
PPC_5130 CDS
T03613
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_5130
Enzymes [BR:
ppro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PPC_5130
DNA repair and recombination proteins [BR:
ppro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PPC_5130
Prokaryotic type
PPC_5130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAO64477
LinkDB
All DBs
Position
5690657..5692102
Genome browser
AA seq
481 aa
AA seq
DB search
MQLIWLRSDLRLHDNTALCAATQRGPTVAVYLLSPEQWQAHDDAPCKVDFWLRNLQSLSK
SLGRLNIPLLIRSAATWDQAPQVLLELCRQLQVRMLHFNQEYGIHESRRDAAVTRVLEEA
DISVQGHLDQLLFQPGSVLTKSGGYFQVFSQFRKVCYSRLHSALPALVASPKAQLPLSIQ
ADPVPRHIDSFPSPSQSLRDLWPAGEDQALGRLEQFTDEQIHYYQSERDFPAKPGTSQLS
PYLAAGVISPRQCLHAALRCNQGEFESGNPGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRDAPEDLAAWQEGRTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDAAPYFRIFNPVSQSERFDAEGRFIK
HWLPQLAGLNKKDIHNPGAMGGLFAVADYPAPMVDLAMSRDRALAAFKALPARPDAGGTH
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacctgcgcctacatgacaacaccgccctctgcgcc
gccacccagcgtggcccgaccgtagcggtgtacctgctgagcccggagcagtggcaggcc
cacgacgatgcgccgtgcaaggttgacttctggctgcgcaatctgcagtcgttgagcaag
tccctgggccggctaaacatccccctgctgatccgcagcgccgccacctgggaccaggcc
ccccaggtcctgctggaactgtgccgacaactgcaggtacgcatgctgcatttcaaccag
gaatacgggatccacgaaagccgtcgcgacgccgcagtgacccgggttctggaagaggcc
gacatcagtgtccagggccacctcgatcaactgctgttccagcccggtagcgtgctgacc
aagagcggcggctacttccaggtcttcagccagttccgcaaggtctgctacagccgcctg
cacagcgcactgccggccctggtcgccagtcccaaggcgcaattgccgctgtcgatccag
gccgatcccgtgccccgtcatatcgacagcttcccatcccccagccaatcactgcgcgac
ctctggccggccggcgaagatcaggccctgggccgcctggaacagttcaccgacgagcag
atccactactaccagagcgaacgcgacttcccggccaagcccggcaccagccagctttcg
ccctacctcgccgccggagtgatctcgccgcggcaatgcctgcacgccgccttgcgctgc
aaccagggagagttcgaaagcggcaatcccggcgccgtcacctggatcaacgaactgctg
tggcgcgagttctacaaacacatcctggtgggttacccacgggtttcccggcaccgcgcc
ttccgcccggaaaccgaggcggtggcctggcgcgacgcccccgaagacctggcggcctgg
caagaagggcgcaccggcctgccgatcatcgacgccgccatgcgccaactgctggagacc
ggctggatgcacaaccgcctgcgaatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgtgaaggcgagcgcttcttcatgcgccacctgatcgacggcgacctggcg
gcgaacaatggcggctggcaatggagttcctccaccggcaccgacgccgcgccgtacttc
cgcattttcaaccccgtgagccagtcggaacgtttcgatgccgaagggcgcttcatcaag
cactggctgccgcaactggcggggttgaacaaaaaggatatccacaacccgggggccatg
ggcggcctgttcgcagtcgccgactacccggcgcccatggtcgacctggccatgtcccgg
gatcgcgccctggccgccttcaaggccctgcctgcgcggccggacgcgggggggacccat
gactga
DBGET
integrated database retrieval system
