Pseudomonas protegens Cab57: PPC_5280
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Entry
PPC_5280 CDS
T03613
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_5280
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PPC_5280
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPC_5280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAO64627
LinkDB
All DBs
Position
complement(5854287..5855111)
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AA seq
274 aa
AA seq
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MDGAVIRPRDIVHGGSILELTAEQEAQGEWIAQDIELDIVYEDDDILVINKPAGLVVHPA
AGHADGTLLNALLHHIPDIINVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVAQLQSRSV
SRIYECIVIGVVTAGGKINAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVK
LETGRTHQIRVHMAHINFPLVGDPAYGGRFRIPPAASQTMVDSLKNFPRQALHARFLELD
HPTTGIRMSWESPLPDDFVWLLSLLKQDREAFIG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtggacggagcggtcatccgcccgcgggacatcgtgcacggcggctccattcttgagctg
actgccgagcaggaggcccagggcgagtggatcgcccaggatatcgagctggacatcgtc
tatgaagatgacgacatcctggtgatcaacaagcctgcgggcctggtggtgcacccggct
gccggccatgccgacggcaccctgctcaatgccctgctgcatcacatcccggacattatc
aatgtgccgcgggccggtatcgtccaccgcctggacaaggacaccacaggactgatggtg
gttgccaagaccatccaggcgcagacccaactggtggctcagctgcaaagccgcagtgtc
agccgcatctatgaatgcatcgtgatcggcgtggtaaccgccgggggcaagatcaacgct
ccgatcggccgtcatggccagcagcgccagcgcatggcggtgatggaaggcggcaagcag
gccgtcagccactaccgggtcctggaacgtttccgttcccacacccatgtgcgggtcaag
ctggaaaccggtcgcacccaccagatccgggtgcacatggcccacatcaacttcccgctg
gtgggtgatccagcctacggcggccgcttccgcattccgccggcggcgagccagaccatg
gtcgactcgctgaagaacttcccgcgccaggccctgcatgcacgcttcctggagctggat
catccgaccaccggtatccgcatgagctgggaatcgccgctgccggacgatttcgtctgg
ctgctgtcgctgctcaagcaggaccgtgaggcgttcatcggatga
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