Pseudomonas protegens Cab57: PPC_5283
Help
Entry
PPC_5283 CDS
T03613
Name
(GenBank) type IV fimbriae expression regulatory protein pilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_5283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppro02022
]
PPC_5283
02035 Bacterial motility proteins [BR:
ppro02035
]
PPC_5283
Two-component system [BR:
ppro02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PPC_5283
Bacterial motility proteins [BR:
ppro02035
]
Pilus system
Twitching motility proteins
PPC_5283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAO64630
LinkDB
All DBs
Position
5857206..5858540
Genome browser
AA seq
444 aa
AA seq
DB search
MNPRQSVLVVDDATETRALLEITLGRMRLHTQSARTLQEARGRLARERFDLCLTDLQLPD
GSGLELLRHIRQSHPNLPVALLSNGACAQASAGALQAGACQLLHKPLDLKQLRAWVGASL
KQATDCATDDPARQLLGDSAPMNALRRHIDKLAHSLAAVYISGESGSGKERVARLLHQLG
PRAQYPFVPVNCGAIPSELMESELFGHCKGSFSGAVSDQPGLFLAAHGGTLFLDEVADLP
LAMQVKLLRALQEKSVRPVGSQQEKSVDVRILCATHKDLKNEVETGRFRQDLYYRLNVIE
LRVPALRERRGDIPALAGHVLQRLARDSGQPAVKLRPEALQALERYDFPGNVRELENLLE
RAQTLCEGRWIETDDLQLPRADSLEARSSAAATQLDLALHLQQVERQLLLQALEETRWNR
TAAARRLSLSFRSMRYRMKKLGLD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacggcaatcggtgctggtggtcgatgacgccacggaaacccgcgcccttctg
gagatcactctgggccgaatgcgcttgcacacccaaagtgcgcgcaccctgcaggaagcc
cgtggccgcctggcccgggagcgctttgacctgtgcctgaccgacctgcagctaccggac
ggcagcgggttggagctgctgcggcacatccgccagtcccaccccaaccttcctgtggcg
ctgctaagcaacggcgcctgtgcacaggccagcgccggcgccctgcaggccggagcctgc
cagttgctgcacaagcccctggacctcaagcaactgcgcgcttgggtaggtgccagcctg
aaacaggctacggactgcgcaacggatgacccagcccggcagttgctgggggactcggcg
cccatgaatgccctgcgtcgccacatcgacaagctggcccacagcctggcggcggtctat
atcagcggcgaatccggcagtggcaaggaacgggtcgcccgtctgctccaccagcttggc
cccagggcccaatacccgttcgtcccggtcaactgcggggcgattccttccgaattgatg
gagagtgaactcttcggccattgcaaaggcagcttcagtggcgccgtcagcgatcagccc
gggttatttctggccgcccacggcggcaccctgtttcttgatgaggtcgccgacctgccc
ctggccatgcaagtaaaactgctgcgagccttgcaggaaaaatccgtgcgccctgtaggc
agccaacaggaaaaatccgtcgacgtgcggattctctgtgccacccacaaggacctgaaa
aacgaggtagagaccggacgctttcgccaggacctctactaccgcctgaacgtcatcgag
ctgcgagtcccggcgttgcgcgagcgccgtggcgacatccccgcactggccgggcacgtc
ctgcagcgcctggccagggacagcggccagcctgccgtcaagctacgtcccgaagccctg
caagccctggagcgctatgactttccgggcaacgtgcgagagctggaaaacctgctggaa
cgggcgcagaccctatgcgaaggacgctggatagaaacagacgatttgcagttgcccaga
gccgacagccttgaagcccgatcatcggcggcggccacccagctagacctggcgctgcac
ctgcaacaggtggagcgccagctgctgctccaggccctggaggaaacccgctggaaccgc
acggcggcggcccggcggctgagcctgtcgtttcgttcgatgcgttaccgcatgaagaag
ctcgggctggactag
DBGET
integrated database retrieval system
