Pseudomonas protegens Cab57: PPC_5286
Help
Entry
PPC_5286 CDS
T03613
Name
(GenBank) type IV pilus-associated protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppro02044
]
PPC_5286
02035 Bacterial motility proteins [BR:
ppro02035
]
PPC_5286
Secretion system [BR:
ppro02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PPC_5286
Bacterial motility proteins [BR:
ppro02035
]
Pilus system
Pilus assembly proteins
PPC_5286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
BAO64633
LinkDB
All DBs
Position
complement(5860108..5863170)
Genome browser
AA seq
1020 aa
AA seq
DB search
MPSIDRGMRRPGWRSLGALLLSLLPVPLAMAFNPASTPLLGAAAVAPNVMLVLDDSLGMN
SIVHAREFDPLLARAAVWRCAGVGGECARGERLAGQAIALSSLGESGCRAGFHSFHDPER
GVRCLKLPDPVGAGNTLYSADYLSWLLAQAKGRERDFTDGSIPNDYRMNVARRLATALVT
RYRWLRLGVATFNSPAPGDPGPGGYIARPISDLSAIEGAVSPAQAEANYQALLATINGLK
AGGHTPLAETYYEITRYLRGMVPYYNLSPALYSSPIQYRCQKNYGVVISAGAADHDTQFP
LNDPLGAGRLPNWDGIGNDGSERDGQTLFLDDLAKFAFDIDLRGPGVDEAGKSWTAVDFP
RQYLNTFTVGFQAHNPLLMGAADYGQGEYFQARSNLERVLAGVLGEGVASAVTAGSGVLD
AASGRYYQSQYDPVDWHGTIRAYGIDNQGRVAVGSPLWSSDSGVDGAGAAVIHETWNTAS
RRPVSLAYGNLSTAQRGELEQSLPAGVSGAELLGWSQGRSVSGLRERRYQLGDIVNSPLV
LATAGQRSAVDGAAGGDYSRYLAQKATAMATRLLVNSNDGLFNVLDPASGERLYGYMPSS
ALGALAQVADPGYRRGERHRYLVDGPLAVFDGQRGGAWQTLALGGVGAGGKSFFAVRLFD
AVHGNTPGALWEIGAPLEPDRNHPFNDLGYAYARPQVARLADGRWAAFIGNGYGSHSGVA
ALYVVDLNDGSLIREIAIDDQPDNGLSSVTLKVNARNEVQAAYAGDLKGRLWKFELSGND
NASWHLAFAGQPLFRTAGGASQPISAPPRLLDHPRGGQLVLFGTGKLNETRDKQSRARQG
FYGVWDAEGGPGGIGESQLQVQHLEAGFSAAAGSFLRSTLNEVRYPAQRGWYLPLVQGGL
AAGERVLNEATLVAGRVVFSTLQLEPDDPCSSAGSGKLIELEAFSGKMLDAAVLDTNGDG
VVDDQDQPSSGVRYVGTVPSLGGVASNGARKIISDSRGGISTLVERPGGGSRRILWRQIQ
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtattgatcggggcatgcgtcggcccggctggcgaagcctgggcgcgctgctg
ctgagcctgttgccggtacctctagccatggcgttcaaccctgccagcaccccgcttctt
ggtgccgcggcggtggcgccgaacgtgatgctggtgctggatgactccctgggcatgaac
agcattgtccatgcccgggagttcgatccgctgctcgcccgggctgcggtctggcgctgt
gccggagtggggggcgagtgtgctcggggtgagcgacttgcaggccaggcgattgccttg
tccagcctcggcgagtcggggtgccgggcaggctttcacagcttccatgatcccgagcgt
ggggtgcgctgcctgaagctgccggacccggttggggcgggaaatacgctgtactccgcg
gactacctgtcctggctactggcgcaggccaagggacgggagcgagacttcactgacggt
tccattcccaacgactaccggatgaatgtggcgcggcggctggcgacggccctggttacc
cggtatcgctggctgcgcctgggggtggccaccttcaactcgccggccccgggtgatccg
ggccctgggggttacattgcccgtcccatcagcgacctgtcggccattgaaggcgctgtg
agcccggcccaggccgaggccaattaccaggccctgctggcgacaatcaacggcctcaag
gccggcggtcatacgccgttggcggaaacctactacgagatcacccgctacctgcgcggc
atggtgccgtactacaacctttcaccggcgctctacagcagccccattcaataccgttgc
cagaagaactacggggtggtgatcagtgccggcgcggcggatcacgatactcagttcccg
ctcaacgaccctttgggggcggggcgcctgcccaactgggacgggatcggcaacgacggt
agcgagcgcgatgggcagactctgttcctcgatgatctggccaagttcgccttcgatatc
gacttgcgtggcccaggagtggatgaggccgggaaaagctggacggcggtggatttcccc
cgtcagtacctgaatacgttcacggtgggtttccaggcccacaatcctctgctgatgggc
gctgccgactacggccagggtgagtatttccaggctcgcagcaaccttgaacgcgtgctg
gcaggcgttctgggcgaaggcgtggccagtgcggtgactgccggcagtggtgtactggat
gccgccagtggtcgttattaccagagccagtacgacccggtcgattggcatggcacgatc
cgcgcctacggcatcgacaatcagggccgagtggctgtcggttcgccgttgtggagcagc
gatagtggtgtggatggtgccggcgcggcggtaatccatgagacctggaacactgccagc
cggcggccggtgagcctggcctacggcaacttgtccaccgctcagcgtggtgaacttgag
cagtcgttgcctgcaggtgtcagtggcgccgagttactgggctggagccagggccgctcc
gtgagcgggctcagggagcgccgctatcagttgggagatatcgtcaattcgccgctggtg
ctggcaactgccgggcagcgcagtgctgtcgatggggctgccgggggcgactacagccgc
tacctggcacagaaagccacggccatggcgacgcgcttgttggtgaacagtaatgacggg
ctgttcaatgtgctggacccggccagcggtgagcgcctctatggctacatgccctccagc
gcgttgggcgccctggcgcaggtcgccgatcccggttatcggcggggcgagcgccatcgc
tatctggtggatggtcccctggcggtgttcgatgggcagcggggcggtgcctggcaaacc
ctggccctggggggcgtcggggcgggcggcaagagtttctttgcggtgcgtctgttcgac
gccgtgcacggcaatacgcctggcgccttgtgggaaatcggcgctcctctcgagccggac
cgcaatcatcctttcaatgacctggggtatgcctatgcccgcccacaggtagcgcgcttg
gccgatggtcgctgggcggctttcatcggcaatggctacggcagccattccggggtggca
gcgctgtatgtggtagacctgaatgatggctcgctgattcgcgagatcgccattgacgac
cagcctgacaatggcctgtcgtccgtcaccctcaaggtcaatgcacgcaatgaagtgcag
gcggcctatgcgggcgacctcaaggggcgactgtggaaattcgagctgtccggcaacgat
aacgccagctggcatctggcatttgccgggcagcccttgttccgcaccgcgggaggcgcc
agccagccgatcagcgcaccgccgcgcctgctcgatcatccccgtggtggtcaattggtg
ctgttcggtacgggcaagctcaacgagacccgggacaagcaaagccgggcgcgccaggga
ttctatggcgtgtgggacgccgagggcggtcctgggggcattggcgaaagtcagttgcag
gtgcagcaccttgaggccggtttcagcgcggcggccggcagtttcctgcgcagcaccctc
aacgaggtgcgttatccggcgcagcgcggctggtacctgcccctggtacaaggtggcctg
gcagccggcgagcgggtgctcaacgaggcgaccctggtggccggcagggtggtgttcagc
accctgcaactggagcccgacgacccttgttcgagtgccggcagtgggaaattgatcgag
ctggaggcgttcagcggtaagatgctcgacgctgcggtgctcgacaccaatggcgacggg
gtcgtggatgaccaggaccagccctccagcggcgtgcgctacgtcggcaccgtgcccagc
ctcggcggagttgccagcaatggcgcccgcaagatcatcagtgactccaggggtggcatc
agcaccctggtggaaaggcccggcggtggcagccggcgcatcctgtggcgacaaatccag
taa
DBGET
integrated database retrieval system
