Pseudomonas protegens Cab57: PPC_5321
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Entry
PPC_5321 CDS
T03613
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00260
Glycine, serine and threonine metabolism
ppro00460
Cyanoamino acid metabolism
ppro00630
Glyoxylate and dicarboxylate metabolism
ppro00670
One carbon pool by folate
ppro00680
Methane metabolism
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
ppro01230
Biosynthesis of amino acids
ppro01240
Biosynthesis of cofactors
ppro04981
Folate transport and metabolism
Module
ppro_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPC_5321 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PPC_5321 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPC_5321 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PPC_5321 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PPC_5321 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PPC_5321 (glyA)
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PPC_5321 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAO64668
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Position
5898281..5899534
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGAAVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEV
FIERGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggttacccg
ggcaagcgttactacggcggctgcgaatacgtcgacgtggttgaacagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccacacgccggttcccag
gccaacgccgcggtctacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccgcggtgtcctcctccggcaagctgtac
aacgctatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaaaatgatcgtggccggcttctctgcctactcgcagatc
ctcgacttcccgcgctttcgcgatatcgccgacaaggttggtgcctacctgttcgtcgac
atggcccacgtggccggtttggtcgccgctggcgtctacccgaacccggtgccattcgct
gacgttgtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaaaaagctcaactccgccgtattccctggcgcccag
ggcggcccactggagcacgtgatcgccgccaaggccatctgcttcaaggaagcactgcag
cctgagttcaaggcttaccaggaacaagtggtgaagaacgcccaggccatggccgaagtg
ttcatcgagcgcggtttcgacgtggtgtccggtggtaccaagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggcaaggacgctgacgccgccctgggcaaagccttc
atcaccgtgaacaagaactccgtaccaaacgatccacgctccccgttcgtcacctccggc
ctgcgcttcggtactccggccgtgaccactcgtggcttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcggacctgaacaacgaagcggtgatcgacgct
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcttaa
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