Pseudomonas protegens Cab57: PPC_5331
Help
Entry
PPC_5331 CDS
T03613
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_5331
DNA repair and recombination proteins [BR:
ppro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPC_5331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
RecA
AAA
SLFN-g3_helicase
Rad51
DUF7125
nSTAND3
AAA_24
AAA_14
NTPase_1
MCM
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAO64678
LinkDB
All DBs
Position
complement(5907969..5909336)
Genome browser
AA seq
455 aa
AA seq
DB search
MAKAKRMYGCTECGSTFPKWAGQCGECGAWNTLTETMIESGGAAAPAGRTGWAGQQAQIK
TLAQVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLKIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggctccacctttcccaaatgg
gccgggcagtgcggtgagtgcggggcctggaacaccctgaccgagaccatgatcgaaagc
ggcggcgcggcggcacctgccgggcgcaccggctgggccgggcagcaggcgcagatcaag
accctggcgcaagtcagcgtcgaggaaattccgcgtttctccaccgcttccggtgaactc
gatcgggtgctgggcggcggcctggtggacggttcggtggtgctgatcggtggtgatccg
gggatcggcaagtcgaccatcctgctgcagaccctgtgcaatatcgccacgcgcatgccg
gcgctgtatgtcaccggtgaggaatcccagcagcaggtggcgatgcgcgcccggcgcctg
ggcctgccccaggaccaactgcgggtgatgaccgagacctgcatcgaaaccatcatcgcc
acggcccgggtagaaaaacccaaggtcatggtgatcgactcgatccagacgattttcacc
gaacaactgcagtcggcccctggcggcgtgtcccaggtgcgcgagagcgcagccttgctg
gtgcgctacgccaagcagagcggcacggcgatcttcctcgtcggccacgtgaccaaggaa
ggcgccctggccgggccgcgggtgctggagcacatggtggacaccgtgctgtatttcgaa
ggcgaatccgacgggcgcctgcgcttgctgcgggcggtgaagaaccgtttcggtgcggtg
aatgagctgggtgtattcggcatgactgaccgcggattgaaggaagtctccaatccttcg
gcgattttcctgactcgtgcccaggaagaggttccgggcagcgtggtgatggccacctgg
gaaggcacccggccgatgctggtggaggtccaggcgctggtggatgacagccacctggcc
aacccgcgccgggtgaccctgggcctggaccagaaccgcctggccatgctgctggcggtg
ctgcatcgccatggcggcatccccacccacgaccaggatgtgttcctcaacgtggtgggc
ggggtcaaggtgctggaaaccgcctccgacctggcgttgatggccgccgtgatgtcgagc
ctgcgcaaccgtccgttgccccatgacctgctggtgtttggcgaagtcggcctgtcgggt
gaggtgcgcccggtgcccagcggtcaggagcgcttgaaggaagcggccaagcacggcttc
aagcgagctatcgtgcccaagggcaacgcgccgaaagaggcgccgccgggcttgaagatc
attgccgtgacccgcctggagcaggcactggatgcacttttcgagtaa
DBGET
integrated database retrieval system
