Pseudomonas protegens Cab57: PPC_5345
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Entry
PPC_5345 CDS
T03613
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_5345
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PPC_5345
Transfer RNA biogenesis [BR:
ppro03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PPC_5345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
RrnaAD
Methyltransf_15
DREV
TRM5-TYW2_MTfase
PrmA
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
BAO64692
LinkDB
All DBs
Position
5922283..5923362
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AA seq
359 aa
AA seq
DB search
MTFDAASYTTQLNDKVARLRDLLAPFDAPEPQVFDSPLQNFRLRAEFRLWREAGERHYAM
FSQDDKRTPILIEEFPIASQRINQLMPQLKAAWQASAPLSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHKAASQLAADLKVSVIGRSKGKREVIGQDYVVEKLDVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEVLGEREDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLQGVDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHHITRCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgacgccgcaagctacaccacccagttgaatgacaaggtcgcgcgcttgcgc
gacctgctggcccccttcgatgcgcccgagcctcaggtcttcgactcgcccctgcagaac
ttccgcctgcgggcagagttccgcctgtggcgcgaggccggtgaacggcactacgcgatg
ttttcccaggacgacaagcgcacgccgatcctcatcgaggaattccccatcgccagccaa
cgcatcaaccagttgatgccccagctcaaggccgcctggcaagccagcgcgcccctgagc
cacaagctgttccaggtggagttcctcaccaccctggccggcgacgcgatgatcaccctg
tgctaccaccgccccctggacgagcactggcacaaggccgcgagccagctggctgccgac
ctcaaggtcagcgtgatcggccgctccaagggcaagcgcgaagtcatcggccaggactac
gtagtggaaaaactcgacgtcggcgggcgtaccttcagctaccgccagcccgaaggcgcc
ttcacccagcccaacggcacggtgaaccagaagatgctcaactgggcttatgaagtcctg
ggcgagcgcgaggacgacctgctggaactgtactgcggcaacggcaacttcaccctgccc
ctggccacccgggtgcgcaaggtgctggccaccgagatcagcaagacctcggtgaatgcg
gccttgagcaacctcagcgaaaacgctgtggataacgtgaccctggtgcgcttgtcggcc
gaagagctgaccgaagccctgaacgaagttcggccgttccgccgcttgcagggcgtggat
ctgaagagctacgaattcggcagcgtgttcgtcgacccgccccgggccggcatggacccg
gacacctgcgaactgacccggcgcttcgacaacatcctgtacatctcctgcaacccggaa
accctggcggccaacatcgcccagttgcacgacacccaccacatcacccgttgtgctcta
ttcgaccagttcccctggacccaccacatggaatccggagtcctgctgacccgccgctga
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