Pseudomonas protegens Cab57: PPC_5392
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Entry
PPC_5392 CDS
T03613
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_5392
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
PPC_5392
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPC_5392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAO64739
LinkDB
All DBs
Position
complement(5972596..5973234)
Genome browser
AA seq
212 aa
AA seq
DB search
MSRPPRPASRRPGAKPFSSSPAKRAAKAAPTEPKLILFNKPFDVLTQFSDGEGRATLKDF
IAVPGVYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPSAEQLQRLR
EGVQLNDGMTLPAEARQLEEPTLWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAV
GLPTLRLVRVRIGDWTLDGLEQGQWKEVAARL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgccccgtcccgcttcccgccgccctggcgccaaaccgttttcctcctct
cccgccaagcgtgcggccaaggccgcgccgaccgagccgaagctgatcctgttcaacaag
cctttcgatgtgctgacccagttcagcgatggcgaggggagggccacgctcaaggacttc
attgcggttcccggggtctacccggccgggcgcctggatcgcgacagtgaagggttgctg
ctgttgaccaatgacgggcagttgcaggcgcgcatcgccgatcccaagcacaagctggcc
aagacctattgggtgcaggtcgagggcgagcccagtgccgagcagttgcagcgcttgcgc
gaaggtgtgcagttgaatgacggcatgaccctgccggccgaggcgcgccagctcgaagaa
ccgacgctatggccgcgcaacccgccggtgcgctttcgcaagagcgtgcccaccagttgg
ctggagttggtgatacgcgaggggcgcaaccgccaggtaaggcgcatgaccgctgcggtg
gggctaccgaccttgcgcctggtgcgggtcaggatcggcgactggaccctggacggcctg
gagcagggccagtggaaagaggtggcggcgcgcttataa
DBGET
integrated database retrieval system
