Pseudomonas protegens Cab57: PPC_5417
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Entry
PPC_5417 CDS
T03613
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00550
Peptidoglycan biosynthesis
ppro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPC_5417
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppro01002
]
PPC_5417
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
PPC_5417
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PPC_5417
Peptidases and inhibitors [BR:
ppro01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PPC_5417
Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PPC_5417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
BAO64764
LinkDB
All DBs
Position
complement(5999557..6000714)
Genome browser
AA seq
385 aa
AA seq
DB search
MNITTFAKRLCLLVPLIITPAAWAVEAMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLP
PASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGII
IQSGNDASVAVSEHIAGSEDAFADMMNKTATDLGMSNSHFMNPTGLPNPEHYSSAHDMAV
LARAIIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSA
VRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGTELAQAQVWKGTTHQV
KAGLAEDLTMTMPKGQLKKLAASMTMNPQLIAPIAKGDVIGKVEVKLDDKVVHSADLIAL
EAVDEGGIFRRMWDSIRLFFYGLFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccacctttgccaaacgcctgtgcctgcttgtcccgctgatcatcacgccc
gccgcctgggcggtcgaagcgatgccgtcgccaccgcaactggccgccaaatcctatgtg
ctcatggacgccagcagcggtaacgtgctggtggagaacaatggtgaccagcgcctgccg
ccggccagcctgaccaagctgatgaccgcctacatcgcgaccctggaaatccgtcgcggc
cagatcggcgagaacgatccggtgaccgtcagcgagaacgcctggcgtaccggcggttcg
cggatgttcatcaaggtgggttcgcaagtcaccgtcagcgacctgctgcacggcatcatc
atccagtcgggtaacgacgccagcgtcgcggtttccgagcatatcgccggtagcgaagac
gcgttcgccgatatgatgaacaagacggctaccgacctgggcatgagcaacagccacttc
atgaaccctaccggcctgccgaacccagagcattactcgtcggcccacgacatggcggtg
ctggctcgcgcgatcatccacgaagaccctgcgcactacgcgatctactcgcagaaggag
ttcttctggaacggcatcaagcaacccaaccgcaacctgctgctgtggcgcgacaagacc
gttgatggcctgaagaccggccataccgacgaagccggctactgcatggtgtcctcggcg
gtgcgtgatggcatgcgcctgatcgccgtggtgttcggtaccaacagcgaacaggctcgt
gctgctgaaacccagaagctgctgacttacggtttccgtttcttcgaaacccagaccttc
taccagaagggcactgagctggcccaggcccaggtctggaagggcaccactcatcaggtc
aaagccggtctggccgaagacctgaccatgactatgcctaaaggccagttgaaaaagctc
gccgccagcatgaccatgaacccgcaactgatcgcgccgatcgccaagggcgacgtgatt
ggtaaagtcgaagtgaaactggacgacaaggtggtgcacagcgctgatctgatcgccctg
gaagcggtcgacgaaggtggtatcttccgtcgcatgtgggatagcatccgtctattcttc
tacggcttgttcaactga
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