Pseudomonas protegens Cab57: PPC_5421
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Entry
PPC_5421 CDS
T03613
Symbol
mrdA_2
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00550
Peptidoglycan biosynthesis
ppro01100
Metabolic pathways
ppro01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPC_5421 (mrdA_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPC_5421 (mrdA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
PPC_5421 (mrdA_2)
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PPC_5421 (mrdA_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PPC_5421 (mrdA_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
BAO64768
LinkDB
All DBs
Position
complement(6004062..6005957)
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AA seq
631 aa
AA seq
DB search
MSQPIRIKDHEKDARLVRGRVVFGAIMVVCLIGVLIARLYYLQVIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQVLDVIVEVLELTPEDRVLFE
KRMKQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKSLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAELALGGRRGAVVALDPSTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASTRVYDPGYYQLPNY
DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMSKFGIGQKVSLDMFE
ESPGLMPTREWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALVASKGKWNRPHL
AKSIEGEKPVDHNPMPDIVLRDPSDWTKVNHGMQQVMHGARGTARKAAAGSPYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPAENPKIVVSVMVENGESGSGVAAPVVR
QVMDAWLLGQDGQLKPEFASPISAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgatccgcatcaaggaccacgaaaaagacgcccgtctggtgcgtggccgt
gtcgtgttcggcgccatcatggtggtttgcctgatcggtgtgctgattgcccggctgtat
tacctgcaggtgatccagtacgactatcactccaccctttcggagaacaaccgggtccac
gtgcagccgattccaccgactcgcgggttgattttcgaccgcaatggcgtggtggtggcg
gacaaccggcccagcttcagcctgagcatgacccgcgagcgttccggcgactggcagcag
gtgctcgacgtgatcgtcgaggtgctggagctgactccggaagaccgggtgctgtttgaa
aagcgcatgaagcaggggcgtcggcctttcgagccggtgccgatcctgttcgagttgacg
gaagagcagatcgcccggatcgcggtgaaccagttccgcctgcccggtgtggaagtggtg
gcccagttggtccggcattacccccagggcgcgcactttgcgcactccgtgggctatatg
gggcggatcaacgagaaagagctcaagtccctcgatccggtgaactacagcggcacccac
catatcggcaagaccggcatcgagcgcttctacgagcctgagctgcacggccaggtgggt
tatgaagaggtcgagaccaacgcccgtggccgggtgctgcgggtgctcaagcgcaccgac
ccgattcccggcaaggacattgtcctgagcctggacatcaagttgcaggaagccgcggaa
ctggccctgggcgggcgccgtggcgcggtggtagccctggatccgagtaccggtgaagtg
ctggcgatggtcagccagccgagcttcgaccccaacctgttcgtcaccggcatcagcttc
aaggcctatgccgagctgcgcgattccatcgaccggccgctgttcaaccgggtgctgcgg
ggcctctatccgccgggttcgaccatcaagccggcggtggccattgccgggctggatgcc
ggcgtggtcacagcttcgacccgggtctacgacccgggctactaccagttgcccaactac
gaccacaagtaccgcaactggaaccgtaccggtgacggttatgtcgacctggataccgcg
atcatgcggtccaacgacacctatttctacgacctggcccacaagctggggatcgaccgg
ctgtccgcctacatgagcaagttcggtatcggccagaaggtctctttggacatgttcgag
gagtcgccgggcttgatgccgacccgcgaatggaagcgcgccacccggcgccaggcctgg
ttcccgggggagaccctgattctcgggatcggccagggctacatgcagtccacgccgttg
caactggcccaggccaccgccctggtcgccagcaagggcaagtggaaccggccgcacctg
gccaaaagcatcgagggcgagaagccggtggatcacaacccgatgccggacattgtcctg
cgtgacccctcggactggacgaaggtcaaccatggcatgcagcaggtgatgcacggtgcc
cggggcaccgcgcgcaaggctgcggccggttcgccgtaccggattgccggcaagagtggt
accgcccaggtggtggcgatcaagcagggcgagaagtacgaccgctccaaggtccaggaa
cggcatcgtgaccacgccttgttcgtcggcttcgcgccggcggaaaaccccaagatcgtg
gtctcggtcatggtcgagaacggtgagtcgggctccggcgtcgcggcaccggtagtgcgt
caggtgatggatgcctggcttctcggccaggacggccagctcaagcccgagttcgccagc
cctatcagcgcggaggctacggcccgtgaagagtaa
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