KEGG   Pseudomonas protegens Cab57: PPC_5475
Entry
PPC_5475          CDS       T03613                                 
Symbol
ribD_2
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro00740  Riboflavin metabolism
ppro01100  Metabolic pathways
ppro01110  Biosynthesis of secondary metabolites
ppro01240  Biosynthesis of cofactors
ppro02024  Quorum sensing
Module
ppro_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PPC_5475 (ribD_2)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPC_5475 (ribD_2)
Enzymes [BR:ppro01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PPC_5475 (ribD_2)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PPC_5475 (ribD_2)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BAO64822
LinkDB
Position
complement(6060288..6061421)
AA seq 377 aa
MSLSPEQAVLDAHYMARALELARKGRYSTHPNPRVGCVVVRDGQVVGEGWHVRAGEPHAE
VHALRAAGELARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGL
QRLAQAGIDTYSGVLEAEARSINKGFLKRMEHGLPYVRVKLAMSLDGRTAMASGESQWIT
GPAARSAVQRLRAESSVVLTGADTVLADDARLTVRAAELGLDPEQTALAMSRPPLRVLID
GRLRVPLDAPFFKAGPALVATCAAVEEQYANGPECLIVPGPDGQVDLRRLLLELAARGVN
EVLVEAGPRLAGAFAQQGLVDEYQIFVAGKFLGSSARPLLDWPLAHMHEAPLLKIIEMRA
VGDDWRVTAIPAPPASV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgagcctgtccccggagcaagcggtacttgacgcccactacatggcccgtgccctggaa
ctggcgcgcaagggccggtattccactcatcccaacccccgcgtcggctgcgtcgtcgtt
cgcgatggccaggtggtcggcgaaggctggcatgtgcgggccggtgaaccccacgccgaa
gtccatgcgctgcgtgccgccggggagctggcccgtggcgctactgcctatgtgacgctc
gagccttgcagccatcacggccgcacaccgccttgcgccgatgccctggtcaatgccggg
gtggcgcgggtggtcgcggcgatgcaggacccgaatccggaagtggccggtcgcggcttg
cagcgtctggcccaggccggcatcgacacctacagcggtgtgctggaagccgaggcccgg
tcgatcaacaagggcttcctgaagcgcatggagcacggcctgccttatgtgcgggtcaag
ctggccatgagtctcgatggccgcaccgccatggccagtggcgagagccaatggattacc
gggcctgccgcccgctccgcggtgcagcgcttgcgggccgaatcttcggtggtgctgacc
ggtgccgacacggtactggccgatgacgcccggctgaccgtacgcgccgccgaactgggc
ctggaccccgagcagactgccctggccatgagccgtccaccgctgcgggtgttgatcgat
gggcgcctgcgagtgcctctggatgcgccgttcttcaaggccggcccggcgttggttgcc
acttgcgcagcggttgaagaacagtacgccaacggtccggagtgcctgatcgttcccggc
cccgatggccaggtcgacctgcgccgcctgctgttggaactggccgcccgtggcgtcaac
gaggtgctggtggaagccggcccgcggctggctggagcctttgctcagcagggcttggtg
gacgagtaccagatattcgtcgccggcaagttcctcggctcctccgcccggccgttgctg
gactggccgctggcgcacatgcacgaggcgccattgctcaagatcattgaaatgcgtgcg
gtgggcgatgactggcgagtcactgccatcccggccccgccagcgagcgtataa

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