Pseudomonas protegens Cab57: PPC_5488 Help Entry PPC_5488          CDS       T03613                                  Symbol lhr Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism ppro  Pseudomonas protegens Cab57 Brite KEGG Orthology (KO) [BR:ppro00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ppro03400]     PPC_5488 (lhr) Enzymes [BR:ppro01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      PPC_5488 (lhr)     5.6.2.6  RNA 3'-5' helicase      PPC_5488 (lhr) DNA repair and recombination proteins [BR:ppro03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     PPC_5488 (lhr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_IclR DprA_WH GntR MarR_2 Sigma70_r4 RPA_C PhoH HTH_Crp_2 Motif Other DBs NCBI-ProteinID:  BAO64835 LinkDB All DBs Position 6070743..6075029 Genome browser AA seq 1428 aa AA seqDB search MNLAQSVNPVLDGFHPAVSAWFKHTFAAVTPAQARAWPLIAQRRSTLIAAPTGSGKTLTA FLAVIDDLVRQGLAGGGQLPDATLVVYVSPLKALSNDIQINLQQPLAGITEQLRRMGLPE LSISTAVRTGDTPQKDRNAMRKSAPQILVTTPESLYVLLGSDSGRRMLASTRSVIVDEIH ALAGSKRGSHLALSLERLQALCAEPLLRIGLSATQKPIEAVSRFLVGHGRPCEIVDIGHA RPRDLDIEVPPVPLSAVMANDVWELVYERLANLAREHRTTLIFVNTRRLAERLARHLSER LGKQAVAAHHGSLAKEQRLEAEQRLKAGDLQVLIATASLELGIDIGDVDLVCQIGSPRSI SAFLQRVGRSGHQVGGTPKGRLFALTRDDLIECAALLDCVRRGELDTLLIPHAPLDVLAQ QIVAEVSCQEWSEAALLDMLRQAAPYADLDQAHYQALLQMLAEGFNGRQGLRSAYLHRDA LARTLRGRRGAQLTALTSGGTIPDNADYSVLLEPQGLNIGSVNEDFAVESIAGDVFQLGN TSYRILRVETGKVRVEDAQGQPPNIPFWLGEAPGRSAELSSAVARLLAQLDELLGATPGQ LQAAIHWLHHELGLNLASAEQLVDYLAPARLALGALPSQDTLIMERFFDESGGTQLVIHS PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFALDEVWRYLHSNSAE HILVQALLDAPLFGVRWRWNAGLALALPRYSGGRKVPPQIQRMKSEDLIASVFPDQIACL ENLAGEREIPDHPLVEQTLDDCLHEAMDSEGWLNLLRRMEQGQVRLLSRELPAPSPLAAE ILSAKPYTFLDDAPLEERRTQAVLARRWSDPQATDDLGALDAEAIAAVAAEAWPAPASAD EMHEALMSLACISEAEAQANLHWPEWLQALSSQGRACRLQAGPGGGLWLALERICCLRAL YPQAALQPALQPVPGFDQAWEAQPVLVELIRARLSGFAPLTLAQIAAPLGLPASSIHQAL IQLESEGYVLRGRFSPGGDEEQWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQ HLSPGTQGQGSAMLAEVVAQFEGYPAAASAWDSDLLPARLKDYSASWLDDLCRSGKVVWS RINSSGKIAGSALRSTPIVLLPRARVALWNALTCPIDSSDLSPKAQKVHAVLSQLGALFF DELLQEAHLLRSELETVLQELVGAGWVNADSFAGLRALITPASKRQNRSSRRGRGAFVGG MDDAGRWALLRRAASEDSAATLEHVAMTLLRRYGVVFWRLLEREADWLPNWRDLLRTFHR LEARGEIRGGRFVSGLAGEQFALPEAIPLLREVRRRPHDGSLIAVCGVDPLNLAGTLLPG PKVPALSGNRLVFRDGLPAAADIGGTQHLWLELEPQAAQALRNKLIRH NT seq 4287 nt NT seq  +upstreamnt  +downstreamnt atgaaccttgcccaatccgtgaatccggtgctggacggcttccaccccgctgtcagcgcc tggttcaagcatacctttgccgcggtgaccccggcccaggcccgcgcctggccgctgatc gcccagcgccgctcgaccctgatcgccgcgcccaccggctccggcaagaccctgaccgcc tttctcgcggtgatcgatgacctggtgcgccaggggctggccggcggtggccagctgcca gacgccaccctggtggtgtatgtgtcgccactcaaggccttgagcaatgacattcagatc aacctgcagcagccactggcgggcatcaccgagcaattgcgccgcatgggcctgccggaa ctgtccatcagcaccgcggtgcgcaccggcgatactccgcagaaagaccgcaacgccatg cgcaagagcgcgccgcagatcctcgtcaccaccccggaatccctctacgtgctgctgggc tcggattccggccgcaggatgctggccagcacccgcagcgtgatcgtcgacgaaatccac gccctggccggcagcaagcgcggcagccacctggccctgagcctggaacgcttgcaggcc ttgtgcgccgaacccttgctgcgcatcggcctgtccgccacgcagaagcccatcgaagcc gtgtcgcgctttctggtgggccacggccgcccttgcgaaatcgtcgatatcggccacgcc cggccccgggacctggacatcgaagtgccgccggtgccgctgtcggcggtcatggccaat gacgtctgggagctggtgtacgagcgcctcgccaacctggccagggaacaccgcaccacg ctgatattcgtcaacacccggcgcctggccgagcgcctggcccgccacctcagcgagcgc ctgggcaagcaggcggtggccgcgcaccacggcagcctggccaaggagcagcgcctggaa gccgagcagcgactcaaggccggcgacctgcaagtgctgatcgctaccgcttccctggag ctggggatcgatatcggtgatgtcgacctggtgtgccagatcggctcgccgcgctcgatc tcggcctttctgcagcgggtcggccgctccggtcaccaggtgggcggcacgcccaagggc cggttgttcgccctgacccgcgacgacctgatcgaatgcgccgccctgctcgactgcgtg cgccggggcgaactggacactctactgattccccatgcccccctggatgtgctggcccag caaatcgtcgctgaagtcagctgccaggagtggtcggaagccgcgctgctggacatgctg cgccaggccgcgccctacgccgacctggatcaggcccactaccaggcgctgttgcagatg ctcgccgagggcttcaacgggcgccagggcctgcgcagcgcctacctgcaccgcgacgcc ctggcccgcaccctgcgcgggcgccgaggcgcccaactgaccgcgctgaccagcggcggg accatccccgacaacgccgactacagcgtgttgctggagccccaggggctgaacattggc agcgtcaacgaagacttcgccgtggaaagcattgccggcgacgtgttccagctgggcaac acctcctatcgcatcctgcgggtggaaaccggcaaggtgcgggtcgaggatgcccagggc cagccgccgaacattcccttctggctcggcgaagcccccgggcgcagcgccgaactctcc agtgccgtggcacgcctgctggcccaactcgacgagttgctcggcgccacgcccggccag ttgcaagcggccatccactggttgcaccacgaactgggcctgaacctggccagcgccgag caactggtggattacctggcaccggcgcgcctggccctgggcgcgctgccgtcccaggac acgctgatcatggagcgcttcttcgacgagtccggcggcacccaactggtgatccacagc cccttcggcagccgcatcaaccgcgcctggggcctggccctacgcaagcgtttctgccgc accttcaatttcgaattgcaggctgccgccagcgaggacgcgatcgtcctttccctgtcc accagccacagcttcgccctggacgaggtctggcgttacctgcacagcaacagcgccgaa cacatcctggtccaggcgctgctggacgcaccgctgttcggcgtgcgctggcgctggaac gccggactggcgctagccctgccgcgctacagcggcgggcgcaaagtgccgccgcagatc cagcgcatgaaaagcgaagacctgatcgccagcgtgtttcccgaccagatcgcctgcctg gaaaacctggccggcgagcgcgagattcccgaccatccgctggtggagcagaccctcgac gactgcctgcacgaagccatggacagcgaaggctggttgaacctgctgcgtcgcatggaa cagggccaggtgcgcctgctcagccgcgaactgccggcgccctcgcccctggcggcggaa atcctcagcgccaagccctacacctttctcgatgacgcccccctggaggaacgccgtacc caggcggtgctggcccggcgctggagcgacccgcaagccaccgacgacctgggcgccctg gatgccgaagcgattgccgcggtggccgccgaagcctggccagccccggccagtgccgat gaaatgcacgaagcgctgatgagcctggcctgtatcagcgaagccgaggcccaggccaac ctccactggcccgagtggctgcaagccctttccagccagggccgcgcctgccgcttgcag gccggcccgggcggcggcttgtggctggccctggaacgcatctgctgtctgcgggcgctg taccctcaggccgccttgcaacccgcgctgcaaccggtccccggtttcgaccaggcctgg gaggcacagccggtcctggtggagctgattcgcgcccgcctcagcggcttcgctcccctg accctggcgcagatcgccgcgcccctgggcctgcccgcttccagcatccaccaggctctg atccagctggagagcgaaggttatgtgctgcgggggcgcttcagccctggcggcgatgaa gaacaatggtgcgaacgtcacctgctggcgcggatccaccgctacacggtgaagcgcctg cgccgggaaatcgaaccggtggccttgcaggatttcatgcgctttctgttcgactggcag cacctgtcgccgggtacccagggccagggcagcgccatgctggccgaggtggtcgcgcag ttcgaaggctaccccgcagcggcctcggcctgggacagcgacctgctgccggcgcgcctg aaggattactccgccagttggctggatgacctgtgccgcagcggcaaggtggtctggagc cggatcaacagcagcggcaagatcgccggcagcgccctgcgcagcacccccatcgtgttg ctgccccgggcccgcgtggcgctctggaacgccctgacttgccccatcgacagcagtgac ctgtcacccaaggcgcagaaggttcacgccgtactgagccagctgggcgcactgtttttc gatgaactgctgcaagaagcccacctgctgcgcagcgaactggaaacagtgctgcaggaa ctggtgggcgccggatgggtgaatgccgacagcttcgccgggctgcgggccctgatcacc ccggccagcaagcgccagaaccgcagcagccgacggggtcgcggcgccttcgtcggagga atggacgacgcggggcgctgggctttgttgcgccgcgccgccagcgaggatagcgccgcc accctggagcacgtggccatgaccctgctacgccgctatggcgtggtgttctggcgcctg ctggagcgcgaggccgactggctgcccaactggcgcgatttgctgcgtaccttccatcgc ctggaagcccgcggagaaattcgcggagggcgcttcgtcagcggcctggccggcgagcag ttcgccctgccggaagccatcccgctactgcgcgaagtgcgccgccggccccatgacggc agcctgatcgcggtgtgcggcgtcgacccgctgaaccttgccgggaccctgctgcccggg cccaaggtcccggccctgagcggcaaccgcctggtgttccgcgacggcctgccggcggcc gccgacatcggcggcacccagcacttgtggctggagttggaaccccaggccgcccaggcc ctgcgcaacaagctcatccggcactga

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