Pseudomonas protegens Cab57: PPC_5570
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Entry
PPC_5570 CDS
T03613
Symbol
prbD
Name
(GenBank) proline betaine ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_5570 (prbD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5570 (prbD)
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PPC_5570 (prbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_16
nSTAND1
AAA_29
oligo_HPY
AAA_25
DUF87
Mg_chelatase
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
BAO64917
LinkDB
All DBs
Position
complement(6159795..6161426)
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AA seq
543 aa
AA seq
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MTVHPSDKPLLEIHDLRIEGHYQDAWHPLIKGIDLSLQRGEVLGLIGESGAGKSTLGLAS
MGYVRDGCRITGGSVRFDGQELVGAKPEALRKLRGLRIAYVAQSSAASFNPAHRLIDQHV
ETAVRNAGIDRAKAQAEAVELYRILRLPNPEQIGQRYPHQVSGGQLQRVMTAMAMACHPD
LIIFDEPTTALDVTTQIEVLVAIRDAVKTYGSAALYISHDLAVVAQMADRIMVLRHGKLV
EEADTRTMLDAPQQDYTRSLWAVRSLRTEPKPCPPQATPLLEVRKASASYGHQPVLHDVS
LKLYRGQTLAVIGESGSGKSSTARLITGLLPPTSGQVLYDGKALPADYRQRSKEQLRRLQ
MIYQIPDTALNPRQRIVDIIGRPLSFYLGLKGQALRQRVAELLEMIELDPALYMDRQPRE
LSGGQKQRICIARALAAEPQLIICDEVTSALDQLVAEGVLKLLNRIQQQLGVAYLFITHD
VATVRAIADEVLVMQRGKVVDHGCREEIFTPPYRDYTGLLFSSEPEMDPDWLDHLLEKRA
LVS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcatccaagtgacaagccgctactggaaatccacgacctgcgtattgaaggc
cattatcaggacgcttggcacccgctgatcaaaggcatcgacttgagcttgcagcggggc
gaagtactgggcctgattggtgaatcgggggcggggaagtcgactctgggcctggcctcc
atgggttatgtgcgtgacggttgccgtatcacgggtggctcggtgcgcttcgatggccag
gaactggtgggcgccaagcccgaagccctgcgcaagctgcgcggcctgcgtatcgcctat
gtcgcgcaaagctcggcggcctcgttcaaccccgcgcaccggctgatcgaccagcatgtc
gaaaccgcggtaaggaacgctggtatcgaccgtgccaaggcacaagccgaagcagtggag
ctctaccgcatactgcgtctgcccaaccccgagcagatcggccagcgctacccgcaccag
gtctccggcggtcagttgcaacgggtgatgaccgccatggccatggcctgccacccggac
ctgatcatcttcgacgaaccgaccacggcgctggatgtcaccacccagatcgaagtgctg
gtggcgattcgcgatgcggtgaaaacctacgggagcgccgccttgtacatcagccacgac
ctggcagtggtggcgcaaatggccgaccgcatcatggttctgcgtcacggcaagctggtg
gaggaggccgacacccggaccatgctcgacgccccacagcaggattacacccgatcgctg
tgggcagtgcgtagcttgcgcaccgaacccaagccgtgcccaccgcaggcaacaccgctg
ctggaggtacgcaaggccagcgccagctacggccatcagccggtgctgcatgatgtctcg
ctcaagctctatcgtggccagaccctggcggtgatcggcgagtcgggcagcggcaagagc
tctacggcacgcttgatcaccgggttgttgccgccgaccagcggccaggtgttgtatgac
ggaaaagcgctgccagctgattatcgccagcgcagcaaggagcaattgcgccgattgcag
atgatttaccagatccccgacaccgcgctcaacccgcgccagcgcatcgtcgacatcatc
ggccggccgctgagtttctacctcggcctcaagggccaggcgctgcgccagcgggtcgcc
gagctattggagatgatcgaactggacccggcgttgtacatggatcgccagccccgcgaa
ctgtctggcgggcagaagcagcgaatctgtatcgcccgggctctggcggccgagccgcaa
ctgatcatctgcgacgaagtcacctcggccctcgaccaactggtggccgaaggcgttctg
aagctgctcaaccgcatccagcagcaactgggcgtggcctacttgttcatcacccacgac
gtcgccaccgtgcgcgccattgccgacgaggtactggtgatgcagcgtgggaaggtggtc
gatcacggctgccgggaggagatctttaccccgccgtaccgcgactacaccggcttgttg
ttctccagtgagccagaaatggatccagactggctcgatcatttgctggagaaaagggcg
ctggtttcctga
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