Pseudomonas protegens Cab57: PPC_5583
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Entry
PPC_5583 CDS
T03613
Name
(GenBank) polyamine ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_5583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5583
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PPC_5583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BAO64930
LinkDB
All DBs
Position
complement(6175279..6176526)
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AA seq
415 aa
AA seq
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MTITVPLNAVTGPTLKQRLARAERVNRWKAQALIAPLVLFLLLVFLVPIVALLYKSVGNP
EVVGGMPRTVAAVSAWDGRGLPAEGAYKALSEDLADARKNQTLGDLSKRLNMELAGYRSL
LTKTARALPFKAEPESYKEAMESLDERWGDPAYWQAIRRNTSSLTPYYLLAAVDHRIDDL
GELAPATPDQSIYLDIFARTFWMGLVITAICLALAYPLAYLLANLPARKSNLLMILVLLP
FWTSILVRVAAWIVLLQSGGLINSALLAMGVIDKPLELVFNRTGVYISMVHILLPFMILP
IYSVMKGISPTYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALL
GSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATIVLYLIYSWLVGASRLRLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccgttcccctgaacgcggtcaccggcccgaccctcaagcagcggctggcc
cgtgccgagcgggtcaaccgctggaaggcccaggcgctgatcgcgcccctggtgctgttt
ctgctgctggtgttcctggtaccgatcgtggcgctgctgtacaagagcgtcggcaacccg
gaagtggtcggcggcatgccgcgtactgtggcggccgtgagtgcctgggacggtcgtggc
ctgcccgctgaaggggcctacaaggcgttgagcgaagacctggcggacgcccgcaagaat
cagaccctgggcgacctgtccaagcgcctgaacatggagttggccggctaccgcagcctg
ctgaccaagaccgctcgcgccctgccgttcaaggccgagcccgaatcctataaagaagcc
atggaaagcctggatgagcgctggggcgacccggcctactggcaggcgatccgccgcaac
accagcagcctgaccccgtactacctgctggcggcggtggaccatcgcatcgacgacctg
ggcgaactggcgccggccaccccggaccagtccatctacctggacatcttcgcccgcacc
ttctggatgggcctggtgatcaccgccatctgcctggccctggcctatcccctggcgtac
ctgctggccaacctgccggcgcgcaagagcaacctcctgatgatcctggtgctgctgccg
ttctggacctcgatcctggtgcgagtggcggcgtggatcgtgctgctgcaatcgggtggc
ctgatcaacagcgcgctgctggccatgggggtgatcgacaagcccctggaactggtgttc
aaccgtaccggggtctacatctccatggtgcacatcctgttgccgttcatgatcctgccg
atctacagcgtgatgaaaggcatctcgccgacctacatgcgtgcggcgatctccctgggc
tgccatccgttcgccagcttctggcgggtgtatttcccgcagacctacgccggggtcggc
gctggttgcctgctggtgttcatcctggcgattggttactacatcaccccggcattgctg
ggcagcccgaacgaccagatggtcagctacttcgtcgccttctataccaacaccagcatc
aactggggcatggccacggccctgggcggcctgctgttgctggcgaccatcgtgctctat
ctgatttacagctggctggtgggcgcaagccgcctgcgcctgagctaa
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