Pseudomonas protegens Cab57: PPC_5708
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Entry
PPC_5708 CDS
T03613
Symbol
choX
Name
(GenBank) choline ABC transporter periplasmic choline-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_5708 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5708 (choX)
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PPC_5708 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
BAO65055
LinkDB
All DBs
Position
6318313..6319269
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AA seq
318 aa
AA seq
DB search
MKGSPSLLLAAMLSLPLLAQAAEPAQCSTVNFSDVGWTDITVTTATTSVVLNALGYKTKT
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYRDAGTVATLRANLENAKYTLAVPE
SLYDKGLKDFADIVKFKKELDGKIYGIEPGNDGNRTIQTMIDKNAFGLKDAGFKVVESSE
AGMLSQVERAQRRDTAVVFLGWEPHPMNTRFKMKYLTGGDEFFGPNFGQATIYTNTRKGY
AEECSNVGQLLKNLSFTLNMESTLMGNVLDDKMKPEAAAKAWLKQNPQVLDTWLAGVTTI
DGKPGLEAVKAKLAQASN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttccccgtcgttgttgttggccgccatgctgagtctgccgcttctggcacaa
gccgcagaaccggcacaatgcagcaccgtaaacttctccgatgtcggctggaccgatatc
accgtgaccaccgccaccaccagcgtcgtgctcaacgccctgggctacaagaccaagacc
accatgatttccgtgcccgtgacctacaagtccctggccgacggcaagaacatggacgtg
ttcctcggcaactggatgccgaccatggaaaacgacatcaagccctaccgcgacgccggg
accgtggccaccctgcgggccaacctggaaaacgccaaatacaccctggcggtgcccgag
tcgctgtacgacaagggcctgaaggacttcgccgacatcgtcaagttcaagaaggaactg
gacggcaagatctacggcatcgagccgggcaacgacggcaaccgcaccatccagaccatg
atcgacaagaatgccttcggcctgaaggacgccggtttcaaggtggtggaatccagcgag
gcaggcatgctgtcccaggtcgagcgcgcacagcgccgtgacactgcggtggtgttcctg
ggctgggaaccgcacccgatgaacacccgtttcaagatgaagtacctgaccggcggcgac
gagttcttcggccccaacttcggccaggccaccatctacaccaacacccgcaagggctat
gccgaagagtgcagcaacgtcggccagttgctgaagaacctgtcgttcaccctgaacatg
gaaagcaccctgatgggcaacgtgctggacgacaagatgaagcctgaggcggccgccaag
gcctggctgaagcagaaccctcaggtgctcgatacctggctcgccggcgtgaccaccatt
gacggtaaacctggcctggaggccgtgaaagccaagcttgcacaagcttcaaattaa
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