Pseudomonas protegens Cab57: PPC_5711
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Entry
PPC_5711 CDS
T03613
Name
(GenBank) betaine/carnitine/choline family transporter
KO
K02168
choline/glycine/proline betaine transport protein
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5711
Transporters [BR:
ppro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPC_5711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCCT
PIG-P
GSKIP_dom
Motif
Other DBs
NCBI-ProteinID:
BAO65058
LinkDB
All DBs
Position
complement(6321526..6323535)
Genome browser
AA seq
669 aa
AA seq
DB search
MSSASLIKTPPEKVRVNGWVFYTSTALILLLTAILIIAPQEAGRLLGIAQAWLSRSFGWY
YMVVIAAYLVFVVGLAFSSYGKLKLGTKQDTPDFSYGAWAGMLFSSGIGISLLYFGASEP
LDHYFNPPEGVPGSNLAARQALQLTFLHWGLHGWAIYALVGLAVAYFAYRHNQPLALRSA
LYPLVGERWVKGAAGHAVDGFGMFVTLLGLVTNLGIGSMQVSSGLENLFGMEHSNTNLLI
VIIVMSTVATIAAVSGVENGIRRLSNLNIVLFSGLLIFVLLFGPTLHLLNGFVQNIGDYL
NGVVLKTFDLYVYEGDSAKSDRWLGLWTLFYWAWWISWAPFVGMFIARISRGRTVRELVA
GVLLIPLGFTLAWLSIFGNSALDLVVNQGAVELGKTALEQPSMAIYQLLEHYPASKIVIG
VSIFVGFVLFLTPADSGAVMMANLSCKGGNVDEDAPHWLRIFWSVVITLVTIGLLFAGNF
EAMQTMVVLAGLPFSVVLICFMFGLHKAMRQDVQIEQEQAQLAERGRRGFSERLSQLDLQ
PTQSVVQRYMDKHVSPALQEAAAQLRNLSLEVQTNLGKSKNLLGLRVEMDEGNPFVYEVS
LDGYLATPSESTQPEGADSEVRSRFYRAEVYLHNGSQEYDLMGFTQEQITRDVLDQFESH
RQLLGRVYS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcctctcttataaagaccccaccggagaaggtgcgggtcaacggttgggtg
ttctacacctccaccgcgctgatcctgttgttgaccgccattctgatcatcgccccgcaa
gaggccggccgactgctgggcattgcccaggcctggttgtcccgcagcttcggctggtac
tacatggtggtgatcgccgcttacctggtgttcgtggtgggcctggcgttctcctcctac
ggcaagctcaagctggggaccaagcaggacaccccggacttcagctacggcgcctgggcg
gggatgctgttttcctccggcatcggcatctcgttgctgtacttcggtgcttccgagccc
ctggaccactacttcaacccgccggaaggcgtaccgggcagcaacctggcggcccgccag
gcgctgcagctgacgttcctgcactggggcctgcacggctgggccatctatgccctggtg
ggcctggcggtggcgtacttcgcctatcggcataaccagccactggcactgcgttcggcg
ttgtacccgctggtgggcgagcgctgggtcaagggcgcggccggccacgcggtggacggt
ttcggcatgttcgtgaccctgctgggcctggtgaccaacctcgggattggttcgatgcag
gtgtcttccggcctggaaaacctgttcggcatggagcacagcaacaccaacctgctgatc
gtgatcatcgtcatgagcacggtggccaccatcgctgcggtgtccggtgtggaaaacggc
atccgccgcctgtccaacctgaacatcgtgctgttcagcggcctgctgatcttcgtcctg
ctgtttggcccgaccctgcacctgctcaacggcttcgtgcagaacatcggcgattacctg
aacggtgtagtgctcaagaccttcgacctctatgtgtatgagggcgacagcgccaagtcc
gatcgctggctgggcctgtggaccctgttctactgggcctggtggatttcctgggcgcca
tttgtaggcatgttcatcgcgcgtatttcccgtggtcgcaccgtgcgtgaactggtggcc
ggcgtattgctgattcccctgggcttcaccctggcctggctgtcgatcttcggtaactcg
gctctggatctggtggtcaatcagggagccgtggagttgggcaagacggctttggaacag
ccgtccatggcgatctaccaactgctcgagcactacccggcctcgaagattgtcatcggt
gtgtcgatcttcgtcggcttcgtgctgttcctgacccccgccgactccggggcggtgatg
atggccaacctttcgtgcaagggcggcaacgtcgacgaagacgccccgcactggctgcgg
atcttctggtcggtggtgatcaccctggtgaccatcggcctgctgttcgccggcaacttc
gaagccatgcagaccatggtggtgctggccggcctgccgttctcggtggtgctgatctgc
ttcatgttcggcttgcacaaggccatgcgccaggacgtgcagatcgaacaggagcaggcg
caactggccgagcgtggccgccgcggtttcagcgagcgcctgagccagctggacctgcaa
ccgacccagtcggtggtgcagcgctacatggacaagcacgtcagcccggccttgcaggaa
gcggcggcgcagttgcgcaacctgagcctggaagtgcagaccaacctgggcaagtcgaag
aacctgctgggccttcgcgtggaaatggatgaaggcaatcccttcgtctatgaagtgagc
ctggacggctacctggcgacgcctagcgaatcgacccagccggaaggggccgacagcgaa
gtgcgcagccgtttctaccgcgccgaggtgtatctgcacaacggcagccaggaatacgac
ttgatgggcttcacccaggagcagatcacccgggatgtgctcgatcagttcgaaagccat
cggcagctccttggccgtgtctatagctga
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