Pseudomonas protegens Cab57: PPC_5801
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Entry
PPC_5801 CDS
T03613
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppro03021
]
PPC_5801
Transcription machinery [BR:
ppro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PPC_5801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
BAO65148
LinkDB
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Position
complement(6413655..6414509)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGQD
MAFDPAAEADDDSAFQSPANYLEDHRYDPALQLEDADWSDNSTSNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttacgcattggttccaggcgcaaacctggaggcttat
gtgcacacggtgaacagcattccattgctgacacccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatcttgaggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctattccggctacgggttggcccaggctgacctgatc
caggaaggcaacgttggcctgatgaaagccgtgaagcgcttcaaccctgaaatgggtgtg
cgcctggtgtcctttgccgtgcactggatcaaggcggaaattcacgagttcatcctgcgt
aactggcggattgtgaaggttgctaccaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgaagaagttcaccgcgtggcggaa
agcctgggcgtggagcctcgtgaagtgcgggaaatggaaagccggctgaccggccaggac
atggccttcgatccggctgcggaagcggacgacgacagcgccttccagtcgccagccaac
tacctggaagaccaccgctacgacccggcgctgcaacttgaggatgccgactggagcgac
aactccaccagcaacctgcacgaagccctggaagtgctggacgaacgcagccgtgacatc
ctctaccagcgctggctggccgaagagaaagccacgctgcacgacctggcgcagaagtac
aacgtttcggccgagcggattcgccagctggaaaaaagcgcgatgaacaagctgaaactg
tccatcgccgcttaa
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