Pseudomonas protegens Cab57: PPC_5968
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Entry
PPC_5968 CDS
T03613
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppro03036
]
PPC_5968 (xerC)
Chromosome and associated proteins [BR:
ppro03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PPC_5968 (xerC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
HTH_38
Phage_int_SAM_4
HTH_70
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
BAO65315
LinkDB
All DBs
Position
6588416..6589312
Genome browser
AA seq
298 aa
AA seq
DB search
MQQQLDAYCAHLRSERQVSPHTLQAYRRDLEKVLGFCEKMQVRSWTDLDIQGLRSLIARL
HQQGQSSRSLARLLSAVRGLYHYLNREGLCTHDPANGLAPPKGELRLPKTLDTDRTLQLL
DGAVEDDFLAHRDQAILELFYSCGLRLSELTSLNLDQLDLADGLVQVHGKGSKTRVLPVG
KKARSALEQWLPLRALSNPPDAALFVSQKGRRLGPRVIQLRVKAAGERELGQNLHPHMLR
HSFASHLLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLAAVYDSAHPRAKRNKGGE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacagctggacgcctactgcgcgcatctgcgcagtgagcgccaggtgtcgccc
cacaccctgcaagcctaccggcgcgacctcgagaaggtgctggggttctgcgagaaaatg
caggtgcgcagctggaccgacctggacatccagggcctgcgcagcctgattgcccgcctg
caccagcagggccagtcgtcccgcagcctggcgcgcctgctgtcagcggtacgcgggctc
taccactacctgaaccgcgaaggcttgtgcactcacgacccggccaacggcctggcgccg
cccaagggcgaactacgcctgcccaagaccctggacaccgaccgtaccctgcagctgctc
gatggcgccgtggaagacgacttcctggcccaccgcgaccaggcgattctcgaacttttc
tactcctgcggcctgcgcctttccgaactgaccagcctcaacctcgatcagttggacctg
gcggacggcctggtgcaggtccatggcaagggcagcaagacccgggtcctgccggtgggc
aagaaggctcggtcagccctggagcaatggctccccctgcgcgccctgagcaacccgcct
gatgctgccctgttcgtcagccagaagggccggcgcctggggccgcgggtcatccagctg
cgggtcaaggccgcgggcgagcgcgaactggggcagaacctgcacccacacatgctgcgc
cattcctttgccagccatttgctggaatcctcccaggatctgcgcgccgtgcaggaactg
ctggggcattcggacatcaagaccacgcagatctacacccacctggacttccagcacctg
gcggcggtctacgacagcgcccacccacgggccaaacgcaacaaaggcggtgagtaa
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