Pseudomonas protegens Cab57: PPC_6003
Help
Entry
PPC_6003 CDS
T03613
Name
(GenBank) solute-binding family 5 protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
ppro02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_6003
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPC_6003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_6003
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPC_6003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAO65350
LinkDB
All DBs
Position
6625109..6626692
Genome browser
AA seq
527 aa
AA seq
DB search
MRLAALPLLLAPLLSPLAQAAALSVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVEFD
ADSGKVVPSLADSWEVSADGLTYVFKLHPKVKFHRTEYFNPSRELTAEDVKFSFERMLDP
AHPWHKIAQSGFPHAQSLQLPSLIKKIDALDPLTVRFTLDHADSTFLATLSMGFASIYSA
EYAEQLLKAGTPEKLNSQPIGSGPFIFGRFQKDASIRYKANRDYFAGKPAVDSLIFAITP
DANVRLQKLRRNECQIALSPKPLDVQAASEDPALKVEHTAAFMTAFVAINSQHPPLDKPE
VRQAINLAFDKGSYLKAVFEGTAEAANGPYPPNTWSFAKDLPGYTHDPEKARQLLAKAGL
KNGFQTTIWTRPSGSLLNPNPSLGAQLLQSDLAQVGIQAEIRVIEWGELIRRAKAGEHDL
LFMGWAGDNGDPDNFLSPQFTCAAVKSGTNFARYCDQNLDKLITAGKTTSEQGVRSKLYQ
QAQTQIQQQALWLPLAHPTAFALTRKQVEGYQVSPFGRQDYSKVSIK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgccgccctcccgctcctgctcgcccctctcctgagccccctggcccaggct
gccgcgctgagcgtctgcaccgaagccagcccggagggcttcgacgtggtgcagtacaac
tcactgaccaccaccaacgcatccgccgacgtgctgatgaaccgcctggtggagttcgac
gccgatagcggcaaggtagtccccagccttgccgacagctgggaggtctctgccgacggc
ctgacctacgtgttcaagctgcaccccaaggtcaagttccaccgcaccgagtatttcaac
cccagccgcgagctgaccgccgaagacgtcaagttcagcttcgagcgcatgctcgatccg
gcccatccgtggcacaagatcgcccagagcggctttccccacgcccaatccctgcagttg
cccagcctgatcaagaagatcgatgccctggacccgctgaccgtacgctttaccctggac
cacgccgattcgaccttcctcgccaccctgagcatgggcttcgcctcgatctactcggcg
gagtacgccgagcaactgctcaaggccggcaccccggagaagctcaacagccagccgatc
ggcagcggcccgttcatcttcgggcgcttccagaaagacgcctcgatccgctacaaggcc
aaccgcgactactttgccggcaagccggcggtcgattcgctgatctttgccattaccccg
gacgccaacgtgcgcttgcagaagctgcgccgcaacgagtgccagatcgcactgtcgccc
aagcccctggatgtccaggccgccagcgaggatccggcactgaaggtcgagcacaccgca
gccttcatgaccgccttcgtcgccatcaacagccagcacccacccctggacaaacccgag
gtacgccaggcaatcaacctggccttcgacaagggcagctacctcaaggcggtctttgaa
ggcaccgccgaagccgccaacggcccttacccgcccaatacctggagcttcgccaaggac
ctgcccgggtacacccacgacccggaaaaggctcgccaactgctggccaaggctggcctg
aagaacggcttccagaccaccatctggacccgcccttctggcagcctgctcaaccccaac
cccagcctgggcgcgcagttgctgcaatcggacctggcccaagtggggatccaggcggaa
atccgcgtgatcgaatggggtgaactgatccgccgcgccaaggccggcgaacacgacctg
ctgttcatgggctgggctggcgacaacggcgacccggataacttcctctcgccacagttc
acctgcgccgccgtcaagtccggcaccaacttcgcccgctactgcgaccagaacctggac
aagctgatcacggccggcaagaccaccagcgaacagggtgtgcgcagcaagctgtaccaa
caggcccagacccagatccagcagcaggcgctgtggctacccctggcacacccgaccgct
ttcgccctgactcgcaagcaggtcgagggctaccaggtgagccccttcgggcgccaggac
tattcgaaagtcagcatcaagtga
DBGET
integrated database retrieval system